RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 NBPF19A0A087WUL8 3843 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 LIPT2A6NK58 231 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 CPSF4LA6NMK7 179 aaKnown RBP14.92□□□□□ -0.02
SDCBP-201ENST00000260130 CD8BP10966 210 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 TNFRSF1BP20333 461 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 UQCRC1P31930 480 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 H3F3AP84243 136 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 TMEM201Q5SNT2 666 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 SYT6Q5T7P8 510 aaPredicted RBP14.92□□□□□ -0.02
SDCBP-201ENST00000260130 PIWIL3Q7Z3Z3 882 aaKnown RBP14.92□□□□□ -0.02
SDCBP-201ENST00000260130 TSPYL5Q86VY4 417 aaPredicted RBP14.92□□□□□ -0.02
SDCBP-201ENST00000260130 P2RY8Q86VZ1 359 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 TUSC5Q8IXB3 177 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 ALPK1Q96QP1 1244 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 SPOCK3Q9BQ16 436 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 PSD2Q9BQI7 771 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 PLSCR4Q9NRQ2 329 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 KIF17Q9P2E2 1029 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 PROCRQ9UNN8 238 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 CACNA1CQ13936 2221 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 SETXQ7Z333 2677 aaKnown RBP14.92□□□□□ -0.02
SDCBP-201ENST00000260130 RGS10O43665 173 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 YES1P07947 543 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 IGFBP2P18065 325 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 AGTR1P30556 359 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 OR1E2P47887 323 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 OXA1LQ15070 435 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 OR7A5Q15622 319 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 C5orf46Q6UWT4 87 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 CBLL1Q75N03 491 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 ADCK1Q86TW2 530 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 ACBD4Q8NC06 268 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 ZNF540Q8NDQ6 660 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 NEURL2Q9BR09 285 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 NAA11Q9BSU3 229 aaPredicted RBP14.91□□□□□ -0.02
SDCBP-201ENST00000260130 RBM24Q9BX46 236 aaKnown RBP14.91□□□□□ -0.02
SDCBP-201ENST00000260130 TAPBPLQ9BX59 468 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 BCO1Q9HAY6 547 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 ING1Q9UK53 422 aaPredicted RBP14.91□□□□□ -0.02
SDCBP-201ENST00000260130 INTS1Q8N201 2190 aaKnown RBP14.91□□□□□ -0.02
SDCBP-201ENST00000260130 AHSA1O95433 338 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 SEMG1P04279 462 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 ZNF787Q6DD87 383 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 PAQR6Q6TCH4 344 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 CCDC103Q8IW40 242 aa14.91□□□□□ -0.02
SDCBP-201ENST00000260130 IPCEF1Q8WWN9 437 aaPredicted RBP14.91□□□□□ -0.02
SDCBP-201ENST00000260130 OPN3Q9H1Y3 402 aaPredicted RBP14.91□□□□□ -0.02
SDCBP-201ENST00000260130 PDP1Q9P0J1 537 aaPredicted RBP14.91□□□□□ -0.02
SDCBP-201ENST00000260130 NDRG4Q9ULP0 352 aaKnown RBP14.91□□□□□ -0.02
SDCBP-201ENST00000260130 CRYBG3Q68DQ2 2970 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 TRAPPC13A5PLN9 417 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 ZNF814B7Z6K7 855 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 CHP2O43745 196 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 FAM20BO75063 409 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 COX6B1P14854 86 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 PSMB9P28065 219 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 MAP2K4P45985 399 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 RPS5P46782 204 aaKnown RBP14.9□□□□□ -0.02
SDCBP-201ENST00000260130 MAD2L1BPQ15013 274 aaPredicted RBP14.9□□□□□ -0.02
SDCBP-201ENST00000260130 ABLIM2Q6H8Q1 611 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 LINC00114Q6XXX2 140 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 MEX3BQ6ZN04 569 aaKnown RBP14.9□□□□□ -0.02
SDCBP-201ENST00000260130 ZNF610Q8N9Z0 462 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 MFSD8Q8NHS3 518 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 PIGXQ8TBF5 258 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 KTI12Q96EK9 354 aaPredicted RBP14.9□□□□□ -0.02
SDCBP-201ENST00000260130 REEP1Q9H902 201 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 KRT84Q9NSB2 600 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 SAMHD1Q9Y3Z3 626 aaKnown RBP14.9□□□□□ -0.02
SDCBP-201ENST00000260130 IGKV1D-42A0A075B6H8 117 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 hCG_2039718K7EN88 272 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 THY1P04216 161 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 CSNK2BP67870 215 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 DEF8Q6ZN54 512 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 PRSS48Q7RTY5 328 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 VTCN1Q7Z7D3 282 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 P3H2Q8IVL5 708 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 DMRTC2Q8IXT2 367 aaPredicted RBP14.9□□□□□ -0.02
SDCBP-201ENST00000260130 NDNFQ8TB73 568 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 ZNF300Q96RE9 604 aaPredicted RBP14.9□□□□□ -0.02
SDCBP-201ENST00000260130 PTDSS2Q9BVG9 487 aa14.9□□□□□ -0.02
SDCBP-201ENST00000260130 ZNF716A6NP11 495 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 ZNF724A8MTY0 619 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 OR2T1O43869 369 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 AKR7A3O95154 331 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 MT-ND2P03891 347 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 LAPTM4AQ15012 233 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 ZNF474Q6S9Z5 364 aaPredicted RBP14.89□□□□□ -0.03
SDCBP-201ENST00000260130 NUFIP2Q7Z417 695 aaKnown RBP14.89□□□□□ -0.03
SDCBP-201ENST00000260130 KIF18BQ86Y91 864 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 TMEM99Q8N816 258 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 ATG16L2Q8NAA4 619 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 TAAR8Q969N4 342 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 ZNF775Q96BV0 537 aaPredicted RBP14.89□□□□□ -0.03
SDCBP-201ENST00000260130 SLC25A36Q96CQ1 311 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 TMEM43Q9BTV4 400 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 POLR2J2Q9GZM3 115 aaKnown RBP14.89□□□□□ -0.03
SDCBP-201ENST00000260130 POLR2J3Q9H1A7 115 aaKnown RBP14.89□□□□□ -0.03
SDCBP-201ENST00000260130 C12orf49Q9H741 205 aa14.89□□□□□ -0.03
SDCBP-201ENST00000260130 ACOT13Q9NPJ3 140 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms