RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 C4orf19Q8IY42 314 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF610Q8N9Z0 462 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 RNF149Q8NC42 400 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 GPR26Q8NDV2 337 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF675Q8TD23 568 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 CPB2Q96IY4 423 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 RAB11FIP5Q9BXF6 653 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 FTHL17Q9BXU8 183 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 TEX101Q9BY14 249 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 CNTD2Q9H8S5 307 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 IL21RQ9HBE5 538 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 CUTCQ9NTM9 273 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 SIDT1Q9NXL6 827 aaKnown RBP7.09□□□□□ -1.27
GPNMB-201ENST00000258733 SS18L2Q9UHA2 77 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 A0A0D9SG52 128 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 SLC33A1O00400 549 aaPredicted RBP7.09□□□□□ -1.27
GPNMB-201ENST00000258733 NDUFB8O95169 186 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 TSPAN13O95857 204 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 SCGB1D1O95968 90 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 PTPRAP18433 802 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 MSR1P21757 451 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 RPS10P46783 165 aaKnown RBP7.09□□□□□ -1.27
GPNMB-201ENST00000258733 GAS1P54826 345 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 TAS2R41P59536 307 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 PPIAP62937 165 aaKnown RBP7.09□□□□□ -1.27
GPNMB-201ENST00000258733 HMGCS1Q01581 520 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 PAX5Q02548 391 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 SMN1Q16637 294 aaKnown RBP7.09□□□□□ -1.27
GPNMB-201ENST00000258733 PLPPR5Q32ZL2 321 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 EIPR1Q53HC9 387 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 PRRT3Q5FWE3 981 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 C3orf38Q5JPI3 329 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 LIPMQ5VYY2 423 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 STEAP4Q687X5 459 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 C8orf82Q6P1X6 216 aaPredicted RBP7.09□□□□□ -1.27
GPNMB-201ENST00000258733 HACD2Q6Y1H2 254 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 BMPERQ8N8U9 685 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 SIDT2Q8NBJ9 832 aaKnown RBP7.09□□□□□ -1.27
GPNMB-201ENST00000258733 OLIG1Q8TAK6 271 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 HAVCR1Q96D42 359 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 C16orf58Q96GQ5 468 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 SEPHS2Q99611 448 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 ZNF350Q9GZX5 532 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 ZDHHC6Q9H6R6 413 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 TXNRD2Q9NNW7 524 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 HMX1Q9NP08 348 aaPredicted RBP7.09□□□□□ -1.27
GPNMB-201ENST00000258733 MYOZ2Q9NPC6 264 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 UBE2J1Q9Y385 318 aaPredicted RBP7.09□□□□□ -1.27
GPNMB-201ENST00000258733 MMP24Q9Y5R2 645 aa7.09□□□□□ -1.27
GPNMB-201ENST00000258733 TRAV39A0A0B4J263 110 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 TCRBV5S2A0A599 114 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 PRR33A8MZF0 331 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 PIP5K1BO14986 540 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 AGPAT2O15120 278 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 TGFB1I1O43294 461 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 CDRT1O95170 752 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 HPRT1P00492 218 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 FPR2P25090 351 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 P2RY2P41231 377 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 MMP16P51512 607 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 ELLP55199 621 aaPredicted RBP7.08□□□□□ -1.28
GPNMB-201ENST00000258733 SRSF3P84103 164 aaKnown RBP7.08□□□□□ -1.28
GPNMB-201ENST00000258733 PITPNAQ00169 270 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 NAAAQ02083 359 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 HTR4Q13639 388 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 MSS51Q4VC12 460 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 EIF5AL1Q6IS14 154 aaKnown RBP7.08□□□□□ -1.28
GPNMB-201ENST00000258733 CCDC144NLQ6NUI1 221 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 ENPP6Q6UWR7 440 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 MOGAT3Q86VF5 341 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 ZSCAN4Q8NAM6 433 aaPredicted RBP7.08□□□□□ -1.28
GPNMB-201ENST00000258733 ZNF738Q8NE65 137 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 OR10G3Q8NGC4 313 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 SLC2A12Q8TD20 617 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 SEMA4DQ92854 862 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 MIB2Q96AX9 1013 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 DPH2Q9BQC3 489 aaPredicted RBP7.08□□□□□ -1.28
GPNMB-201ENST00000258733 SGIP1Q9BQI5 828 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 NRIP2Q9BQI9 281 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 AARSD1Q9BTE6 412 aaKnown RBP7.08□□□□□ -1.28
GPNMB-201ENST00000258733 MBNL1Q9NR56 388 aaKnown RBP7.08□□□□□ -1.28
GPNMB-201ENST00000258733 FLRT1Q9NZU1 646 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 KIAA1024Q9UPX6 916 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 TMED3Q9Y3Q3 217 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 ORC6Q9Y5N6 252 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 HS3ST3A1Q9Y663 406 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 TRAV30A0A087WSZ9 112 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 FITM1A5D6W6 292 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 DHRS7CA6NNS2 312 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 C4orf47A7E2U8 309 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 NME4O00746 187 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 ANXA1P04083 346 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 GOT1P17174 413 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 S100A10P60903 97 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 RAP2BP61225 183 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 DLK1P80370 383 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 RING1Q06587 406 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 GSG1Q2KHT4 349 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 ASPHD2Q6ICH7 369 aa7.08□□□□□ -1.28
GPNMB-201ENST00000258733 PTCRAQ6ISU1 281 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms