RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 SLC43A1O75387 559 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 CLDN12P56749 244 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 LTBQ06643 244 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 RPL18Q07020 188 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 SIGLEC14Q08ET2 396 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 PAPD4Q6PIY7 484 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 TMEM91Q6ZNR0 172 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 GALNT6Q8NCL4 622 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 OR11H7Q8NGC8 314 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 OR14A2Q96R54 314 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 LPAR4Q99677 370 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 THAP7Q9BT49 309 aaPredicted RBP13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 EIF3KQ9UBQ5 218 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 IGKV1D-42A0A075B6H8 117 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 GATBO75879 557 aaKnown RBP13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 EIF4EP06730 217 aaKnown RBP13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 CELA2AP08217 269 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 ZNF85Q03923 595 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 ZBTB37Q5TC79 503 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 SLC6A19Q695T7 634 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 LRRC69Q6ZNQ3 347 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 SPERTQ8NA61 448 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 EDAQ92838 391 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 KIAA1143Q96AT1 154 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 HYLS1Q96M11 299 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 ADAD1Q96M93 576 aaKnown RBP13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 ULBP3Q9BZM4 244 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 SPATA2Q9UM82 520 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 ZNF337Q9Y3M9 751 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 FREM3P0C091 2139 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 EFCAB7A8K855 629 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 PTHLHP12272 177 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 CCL4P13236 92 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 IL11P20809 199 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 EIF1AXP47813 144 aaKnown RBP13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 EMP2P54851 167 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 FOXK1P85037 733 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 SKP2Q13309 424 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 ACSM3Q53FZ2 586 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 DPY19L4Q7Z388 723 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 SLC35F2Q8IXU6 374 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 PM20D2Q8IYS1 436 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 ZNF680Q8NEM1 530 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 CNN2Q99439 309 aaKnown RBP13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 SOSTQ9BQB4 213 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 MED18Q9BUE0 208 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 MED17Q9NVC6 651 aa13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 RPH3AQ9Y2J0 694 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-201ENST00000257604 NPIPB9F8W1W9 429 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 FMO6PO60774 539 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 SLC22A5O76082 557 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 OR7A10O76100 309 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 MT-ND4P03905 459 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 GP1BBP13224 206 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 SPI1P17947 270 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 GIFP27352 417 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 EPHA8P29322 1005 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 EGR4Q05215 589 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 SLC25A35Q3KQZ1 300 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 SFRP4Q6FHJ7 346 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 LIX1LQ8IVB5 337 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 LSMEM1Q8N8F7 131 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 KCNJ15Q99712 375 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 KCNN3Q9UGI6 736 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 SUSD2Q9UGT4 822 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 MRTO4Q9UKD2 239 aaKnown RBP13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 FLVCR2Q9UPI3 526 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 RASD1Q9Y272 281 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 CEP250Q9BV73 2442 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 TRDV1A0A1B0GX56 115 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 IL33O95760 270 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 PER3P56645 1201 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 GALEQ14376 348 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 TOMM20Q15388 145 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 ETFDHQ16134 617 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 MEP1BQ16820 701 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 MRGPREQ86SM8 312 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 C17orf82Q86X59 251 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 SERPINA12Q8IW75 414 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 ZSCAN1Q8NBB4 408 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 ADAMTS18Q8TE60 1221 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 ALG12Q9BV10 488 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 TSPAN10Q9H1Z9 355 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 POLE3Q9NRF9 147 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 ZMIZ1Q9ULJ6 1067 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 ADAMTS9Q9P2N4 1935 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 RALGAPA1Q6GYQ0 2036 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 TCRBV16S1A1N1A0A5B0 115 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 CFDP00746 253 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 PDGFAP04085 211 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 NR0B2Q15466 257 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 NTRK2Q16620 822 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 SLC25A30Q5SVS4 291 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 TMEM71Q6P5X7 295 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 TEX261Q6UWH6 196 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 ARIH2OSQ8N7S6 290 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 ZNF671Q8TAW3 534 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 MR1Q95460 341 aa13.28□□□□□ -0.28
TRAFD1-201ENST00000257604 ADIPOR1Q96A54 375 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms