RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 IKZF2Q9UKS7 526 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 NUBP2Q9Y5Y2 271 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 PIAS3Q9Y6X2 628 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 IFITM5A6NNB3 132 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 ARPC3O15145 178 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 CSTAP01040 98 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 GUSBP08236 651 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 ACTA2P62736 377 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 ACTG2P63267 376 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 FUT7Q11130 342 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 LRRN1Q6UXK5 716 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 DPY19L2P2Q6ZN68 376 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 IDO2Q6ZQW0 420 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 OVCH1Q7RTY7 1134 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 FOXN4Q96NZ1 517 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 GPX7Q96SL4 187 aaPredicted RBP9.2□□□□□ -0.94
COPB1-201ENST00000249923 CCDC3Q9BQI4 270 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 C20orf85Q9H1P6 137 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 SEMA6CQ9H3T2 930 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 LIN7BQ9HAP6 207 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 DIABLOQ9NR28 239 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 TAS2R3Q9NYW6 316 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 FRRS1LQ9P0K9 344 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 ABRACLQ9P1F3 81 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 CAMK2AQ9UQM7 478 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 SPACA6W5XKT8 324 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 CPAMD8Q8IZJ3 1885 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 FER1L5A0AVI2 2057 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 COL6A3P12111 3177 aa9.2□□□□□ -0.94
COPB1-201ENST00000249923 SPTY2D1-AS1A0A0U1RR47 76 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 IFNGP01579 166 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 F13BP05160 661 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 YPEL5P62699 121 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 OPCMLQ14982 345 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 YOD1Q5VVQ6 348 aaPredicted RBP9.19□□□□□ -0.94
COPB1-201ENST00000249923 C3P1Q6ZMU1 363 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 GLRX5Q86SX6 157 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 ATG4DQ86TL0 474 aaPredicted RBP9.19□□□□□ -0.94
COPB1-201ENST00000249923 MCATQ8IVS2 390 aaKnown RBP9.19□□□□□ -0.94
COPB1-201ENST00000249923 CXorf58Q96LI9 332 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 AMELYQ99218 206 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 MAP3K3Q99759 626 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 OR10A5Q9H207 317 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 FBRSQ9HAH7 460 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 DLL4Q9NR61 685 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 B3GNT2Q9NY97 397 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 OR5V1Q9UGF6 321 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 ING1Q9UK53 422 aaPredicted RBP9.19□□□□□ -0.94
COPB1-201ENST00000249923 TRAV8-7A0A075B6U6 113 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 IFNA16P05015 189 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 OR8G3PP0DMU2 310 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 GBX2P52951 348 aaPredicted RBP9.19□□□□□ -0.94
COPB1-201ENST00000249923 TAGLNQ01995 201 aaKnown RBP9.19□□□□□ -0.94
COPB1-201ENST00000249923 SKP2Q13309 424 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 KCNAB1Q14722 419 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 HSD17B12Q53GQ0 312 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 UBE2NLQ5JXB2 153 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 ASPHD2Q6ICH7 369 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 PWWP2BQ6NUJ5 590 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 LEG1Q6P5S2 330 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 Q6ZS52 159 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 FCRLAQ7L513 359 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 ATOH1Q92858 354 aaPredicted RBP9.19□□□□□ -0.94
COPB1-201ENST00000249923 RADILQ96JH8 1075 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 ALG12Q9BV10 488 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 LRRC61Q9BV99 259 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 EMC7Q9NPA0 242 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 TAS2R10Q9NYW0 307 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 MEIKINA0A087WXM9 373 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 TMEM72A0PK05 275 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 UBE2QL1A1L167 161 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 ZNF879B4DU55 563 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 AIPO00170 330 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 PDCD5O14737 125 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 CTDSPLO15194 276 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 SEMA4FO95754 770 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 CD1AP06126 327 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 SQSTM1Q13501 440 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 PON3Q15166 354 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 ZNF74Q16587 644 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 MESTQ5EB52 335 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 CD276Q5ZPR3 534 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 ZFP82Q8N141 532 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 FAM160A2Q8N612 972 aaPredicted RBP9.19□□□□□ -0.94
COPB1-201ENST00000249923 ZDHHC1Q8WTX9 485 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 ADAMTS14Q8WXS8 1223 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 HGDQ93099 445 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 KTI12Q96EK9 354 aaPredicted RBP9.19□□□□□ -0.94
COPB1-201ENST00000249923 CDCA3Q99618 268 aaPredicted RBP9.19□□□□□ -0.94
COPB1-201ENST00000249923 HRASLSQ9HDD0 168 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 CA10Q9NS85 328 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.19□□□□□ -0.94
COPB1-201ENST00000249923 FARSAQ9Y285 508 aaKnown RBP9.19□□□□□ -0.94
COPB1-201ENST00000249923 NPTNQ9Y639 398 aa9.19□□□□□ -0.94
COPB1-201ENST00000249923 FAM221BA6H8Z2 402 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 BLOC1S5-TXNDC5H3BN57 136 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 CTNSO60931 367 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 MAS1P04201 325 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 ASAH2BP0C7U1 165 aa9.18□□□□□ -0.94
COPB1-201ENST00000249923 LTBRP36941 435 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms