RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SLC35D2Q76EJ3 337 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 ZNF627Q7L945 461 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 CCDC36Q8IYA8 594 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 DEFB107AQ8IZN7 70 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 RNF113BQ8IZP6 322 aaKnown RBP11.17□□□□□ -0.62
VPREB3-201ENST00000248948 ARHGAP24Q8N264 748 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 RNF148Q8N7C7 305 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 FAM169BQ8N8A8 192 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 LILRB1Q8NHL6 650 aaPredicted RBP11.17□□□□□ -0.62
VPREB3-201ENST00000248948 TMEM171Q8WVE6 324 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 ACOT11Q8WXI4 607 aaPredicted RBP11.17□□□□□ -0.62
VPREB3-201ENST00000248948 BCL2L2Q92843 193 aaPredicted RBP11.17□□□□□ -0.62
VPREB3-201ENST00000248948 ZNF566Q969W8 418 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 BPIFA2Q96DR5 249 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 EMC6Q9BV81 110 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 GSX2Q9BZM3 304 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 FAIMQ9NVQ4 179 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 CRNNQ9UBG3 495 aaPredicted RBP11.17□□□□□ -0.62
VPREB3-201ENST00000248948 CD300AQ9UGN4 299 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 SNX13Q9Y5W8 968 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 ENPP4Q9Y6X5 453 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 MAP1AP78559 2803 aaPredicted RBP11.17□□□□□ -0.62
VPREB3-201ENST00000248948 ZNF469Q96JG9 3925 aaPredicted RBP11.16□□□□□ -0.62
VPREB3-201ENST00000248948 A0A1W2PRG6 482 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 A0A1W2PRQ8 180 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 J3KTA2 159 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 M0R3G1 203 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 PIP5K1CO60331 668 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 ENTPD5O75356 428 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 SERPINI2O75830 405 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 SEMG1P04279 462 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 IFI30P13284 250 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 RHCEP18577 417 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 FUT1P19526 365 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 SPOCK1Q08629 439 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 CAMK2DQ13557 499 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 DGCR6Q14129 220 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 PHYHD1Q5SRE7 291 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 SHEQ5VZ18 495 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 CARD17Q5XLA6 110 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 TGIF2LYQ8IUE0 185 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 PIAS4Q8N2W9 510 aaPredicted RBP11.16□□□□□ -0.62
VPREB3-201ENST00000248948 FAM156AQ8NDB6 213 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 RBM15BQ8NDT2 890 aaKnown RBP11.16□□□□□ -0.62
VPREB3-201ENST00000248948 NOXO1Q8NFA2 376 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 OR6N1Q8NGY5 312 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 TMEM54Q969K7 222 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 SLC25A44Q96H78 314 aaPredicted RBP11.16□□□□□ -0.62
VPREB3-201ENST00000248948 TXNDC15Q96J42 360 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 NSMCE2Q96MF7 247 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 SEPHS2Q99611 448 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 KATNB1Q9BVA0 655 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 GRIP2Q9C0E4 1043 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 MUC13Q9H3R2 512 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 NDUFAF4Q9P032 175 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 ADAM21Q9UKJ8 722 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 TMEM5Q9Y2B1 443 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 VPS13CQ709C8 3753 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 ALPK2Q86TB3 2170 aa11.16□□□□□ -0.62
VPREB3-201ENST00000248948 MCIDASD6RGH6 385 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 BLOC1S5-TXNDC5H3BN57 136 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 BCL10O95999 233 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 IGKV3-15P01624 115 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 IGLV1-44P01699 117 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 IGHG1P01857 330 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 IGHMP01871 453 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 H1F0P07305 194 aaKnown RBP11.15□□□□□ -0.62
VPREB3-201ENST00000248948 DANCRP0C864 163 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 PGA4P0DJD7 388 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 PGA3P0DJD8 388 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 NR2C1P13056 603 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 ITGA2P17301 1181 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 TCN1P20061 433 aaPredicted RBP11.15□□□□□ -0.62
VPREB3-201ENST00000248948 YAP1P46937 504 aaKnown RBP11.15□□□□□ -0.62
VPREB3-201ENST00000248948 SLC9A3P48764 834 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 ARF1P84077 181 aaKnown RBP11.15□□□□□ -0.62
VPREB3-201ENST00000248948 PRKCDQ05655 676 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 MELKQ14680 651 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 TAF11Q15544 211 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 NRN1LQ496H8 165 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 MTX3Q5HYI7 312 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 SLC22A25Q6T423 547 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 ZNF730Q6ZMV8 503 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 MBOAT2Q6ZWT7 520 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 TSEN54Q7Z6J9 526 aaKnown RBP11.15□□□□□ -0.62
VPREB3-201ENST00000248948 DTX2Q86UW9 622 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 KRTAP1-3Q8IUG1 177 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 NRMQ8IXM6 262 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 DEPDC4Q8N2C3 294 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 FAM86B1Q8N7N1 296 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 SMAP2Q8WU79 429 aaPredicted RBP11.15□□□□□ -0.62
VPREB3-201ENST00000248948 ASB10Q8WXI3 467 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 NANOS1Q8WY41 292 aaKnown RBP11.15□□□□□ -0.62
VPREB3-201ENST00000248948 C7orf34Q96L11 122 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 DHRS1Q96LJ7 313 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 SLC38A2Q96QD8 506 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 CDRT15Q96T59 188 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 FOXB1Q99853 325 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 NMNAT1Q9HAN9 279 aaPredicted RBP11.15□□□□□ -0.62
VPREB3-201ENST00000248948 INIPQ9NRY2 104 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms