RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 OR10H4Q8NGA5 316 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 OR5M1Q8NGP8 315 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 UFD1Q92890 307 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 ZMYND19Q96E35 227 aaPredicted RBP12.73□□□□□ -0.37
SDF2-201ENST00000247020 KLHL15Q96M94 604 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 OXGR1Q96P68 337 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 SIGLEC12Q96PQ1 595 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 UBL7Q96S82 380 aaPredicted RBP12.73□□□□□ -0.37
SDF2-201ENST00000247020 QPCTLQ9NXS2 382 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 RASD1Q9Y272 281 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 MED13Q9UHV7 2174 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 NME2P1O60361 137 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 SERPINI2O75830 405 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 AKR7A3O95154 331 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 PLGP00747 810 aaPredicted RBP12.73□□□□□ -0.37
SDF2-201ENST00000247020 MT-ND5P03915 603 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 HPNP05981 417 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 NME2P22392 152 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 GADD45AP24522 165 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 SFTPDP35247 375 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 H3F3AP84243 136 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 CDC20Q12834 499 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 POU4F3Q15319 338 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 HYAL4Q2M3T9 481 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 SLC25A25Q6KCM7 469 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 B3GLCTQ6Y288 498 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 SLC16A9Q7RTY1 509 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 UEVLDQ8IX04 471 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 PHC2Q8IXK0 858 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 FAM83FQ8NEG4 500 aaPredicted RBP12.73□□□□□ -0.37
SDF2-201ENST00000247020 OR6K6Q8NGW6 343 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 OR14L1PQ8NHC6 308 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 FNDC8Q8TC99 324 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 HAVCR2Q8TDQ0 301 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 TM9SF4Q92544 642 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 DNAJA3Q96EY1 480 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 COQ7Q99807 217 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 NAA11Q9BSU3 229 aaPredicted RBP12.73□□□□□ -0.37
SDF2-201ENST00000247020 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 SYT4Q9H2B2 425 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 TMEM185BQ9H7F4 350 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 TRIM36Q9NQ86 728 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 B3GAT1Q9P2W7 334 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 STUB1Q9UNE7 303 aa12.73□□□□□ -0.37
SDF2-201ENST00000247020 FAM186AA6NE01 2351 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 A0A1W2PNR3 127 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 SLC22A23A1A5C7 686 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 CENPBD1B2RD01 187 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 KLRC4-KLRK1H3BQV0 150 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 PHYHO14832 338 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 NKX2-8O15522 239 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 TFP02787 698 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 SP1P08047 785 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 MRPL3P09001 348 aaKnown RBP12.72□□□□□ -0.37
SDF2-201ENST00000247020 CD46P15529 392 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 CD53P19397 219 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 GALP22466 123 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 GDF1P27539 372 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 SHC1P29353 583 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 GPR85P60893 370 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 FOXK1P85037 733 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 POU3F1Q03052 451 aaPredicted RBP12.72□□□□□ -0.37
SDF2-201ENST00000247020 ZNF85Q03923 595 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 DOC2BQ14184 412 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 SPCS2Q15005 226 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 TOMM20Q15388 145 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 NHLRC1Q6VVB1 395 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 LINC00696Q6ZRV3 163 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 LINC00299Q6ZSB3 139 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 USP43Q70EL4 1123 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 PM20D2Q8IYS1 436 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 KBTBD8Q8NFY9 601 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 SPRYD4Q8WW59 207 aaPredicted RBP12.72□□□□□ -0.37
SDF2-201ENST00000247020 GATAD2BQ8WXI9 593 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 ZHX1-C8orf76Q96EF9 292 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 ADAD1Q96M93 576 aaKnown RBP12.72□□□□□ -0.37
SDF2-201ENST00000247020 KCNK17Q96T54 332 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 TSPAN10Q9H1Z9 355 aaPredicted RBP12.72□□□□□ -0.37
SDF2-201ENST00000247020 ZNF552Q9H707 407 aaPredicted RBP12.72□□□□□ -0.37
SDF2-201ENST00000247020 ZNF703Q9H7S9 590 aaPredicted RBP12.72□□□□□ -0.37
SDF2-201ENST00000247020 BABAM2Q9NXR7 383 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 B9D1Q9UPM9 204 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 FREM3P0C091 2139 aa12.72□□□□□ -0.37
SDF2-201ENST00000247020 RIF1Q5UIP0 2472 aaKnown RBP12.71□□□□□ -0.37
SDF2-201ENST00000247020 ZFHX2Q9C0A1 2572 aaPredicted RBP12.71□□□□□ -0.37
SDF2-201ENST00000247020 TRABD2BA6NFA1 517 aa12.71□□□□□ -0.37
SDF2-201ENST00000247020 ZNF670-ZNF695F2Z2N8 137 aa12.71□□□□□ -0.37
SDF2-201ENST00000247020 GFRA3O60609 400 aa12.71□□□□□ -0.37
SDF2-201ENST00000247020 RFPL3SP0C7P2 107 aa12.71□□□□□ -0.37
SDF2-201ENST00000247020 NR2C1P13056 603 aa12.71□□□□□ -0.37
SDF2-201ENST00000247020 HLA-DOBP13765 273 aa12.71□□□□□ -0.37
SDF2-201ENST00000247020 IFNGR1P15260 489 aa12.71□□□□□ -0.37
SDF2-201ENST00000247020 TCEA1P23193 301 aaKnown RBP12.71□□□□□ -0.37
SDF2-201ENST00000247020 GABRA5P31644 462 aa12.71□□□□□ -0.37
SDF2-201ENST00000247020 AGFG1P52594 562 aaKnown RBP12.71□□□□□ -0.37
SDF2-201ENST00000247020 VBP1P61758 197 aa12.71□□□□□ -0.37
SDF2-201ENST00000247020 CDONQ4KMG0 1287 aa12.71□□□□□ -0.37
SDF2-201ENST00000247020 ATP1A1-AS1Q5TC04 95 aa12.71□□□□□ -0.37
SDF2-201ENST00000247020 LIPKQ5VXJ0 399 aa12.71□□□□□ -0.37
SDF2-201ENST00000247020 IGFL2Q6UWQ7 119 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms