RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SERINC1Q9NRX5 453 aa20.98■□□□□ 0.95
MSX2-201ENST00000239243 VSX1Q9NZR4 365 aaPredicted RBP20.98■□□□□ 0.95
MSX2-201ENST00000239243 LOXL2Q9Y4K0 774 aa20.98■□□□□ 0.95
MSX2-201ENST00000239243 DVL2O14641 736 aa20.98■□□□□ 0.95
MSX2-201ENST00000239243 MAGEB4O15481 346 aaPredicted RBP20.98■□□□□ 0.95
MSX2-201ENST00000239243 NCR1O76036 304 aa20.98■□□□□ 0.95
MSX2-201ENST00000239243 SHC1P29353 583 aa20.98■□□□□ 0.95
MSX2-201ENST00000239243 ZNF79Q15937 498 aa20.98■□□□□ 0.95
MSX2-201ENST00000239243 PLPPR5Q32ZL2 321 aa20.98■□□□□ 0.95
MSX2-201ENST00000239243 METAP1DQ6UB28 335 aaPredicted RBP20.98■□□□□ 0.95
MSX2-201ENST00000239243 DND1Q8IYX4 353 aaKnown RBP20.98■□□□□ 0.95
MSX2-201ENST00000239243 SETD6Q8TBK2 473 aa20.98■□□□□ 0.95
MSX2-201ENST00000239243 PHYHIPQ92561 330 aa20.98■□□□□ 0.95
MSX2-201ENST00000239243 INTS14Q96SY0 518 aa20.98■□□□□ 0.95
MSX2-201ENST00000239243 RHBDL2Q9NX52 303 aa20.98■□□□□ 0.95
MSX2-201ENST00000239243 LAMP5Q9UJQ1 280 aa20.98■□□□□ 0.95
MSX2-201ENST00000239243 TEX51A0A1B0GUA7 166 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 A0A1W2PQ72 361 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 AVPR2P30518 371 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 ZMAT1Q5H9K5 638 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 TMEM81Q6P7N7 255 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 ZNF554Q86TJ5 538 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 GDPD1Q8N9F7 314 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 NLGN4YQ8NFZ3 816 aaPredicted RBP20.97■□□□□ 0.95
MSX2-201ENST00000239243 RPS4Y2Q8TD47 263 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 COL27A1Q8IZC6 1860 aaPredicted RBP20.97■□□□□ 0.95
MSX2-201ENST00000239243 NSG1A0A0A6YYJ2 146 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 A6NIZ1 184 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 NPIPB13A6NJU9 1138 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 NPIPB4C9JG80 1138 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 SLC19A2O60779 497 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 APOA1P02647 267 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 PTBP1P26599 531 aaKnown RBP eCLIP20.97■□□□□ 0.95
MSX2-201ENST00000239243 RAP1BP61224 184 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 RAP1AP62834 184 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 H1FNTQ75WM6 255 aaPredicted RBP20.97■□□□□ 0.95
MSX2-201ENST00000239243 TRILQ7L0X0 811 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 NDUFAF7Q7L592 441 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 OR6N2Q8NGY6 317 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 TTYH2Q9BSA4 534 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 PTGES2Q9H7Z7 377 aa20.97■□□□□ 0.95
MSX2-201ENST00000239243 TRAV1-2A0A0B4J238 106 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 HSPB2A8KAH6 182 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 STK17BO94768 372 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 KRT8P05787 483 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 EGR3Q06889 387 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 OR7A5Q15622 319 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 HSPB2Q16082 182 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 OR2M3Q8NG83 312 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 OR11G2Q8NGC1 345 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 NPAS1Q99742 590 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 PADI1Q9ULC6 663 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 B9D1Q9UPM9 204 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 TFPIP10646 304 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 DAP3P51398 398 aaKnown RBP20.96■□□□□ 0.95
MSX2-201ENST00000239243 ARL5BQ96KC2 179 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 PPIL3Q9H2H8 161 aaKnown RBP20.96■□□□□ 0.95
MSX2-201ENST00000239243 CHST11Q9NPF2 352 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 C14orf119Q9NWQ9 140 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 ALKBH4Q9NXW9 302 aa20.96■□□□□ 0.95
MSX2-201ENST00000239243 CHCHD2Q9Y6H1 151 aaPredicted RBP20.96■□□□□ 0.95
MSX2-201ENST00000239243 CPAMD8Q8IZJ3 1885 aa20.95■□□□□ 0.94
MSX2-201ENST00000239243 ANKRD33BA6NCL7 494 aa20.95■□□□□ 0.94
MSX2-201ENST00000239243 TVP23AA6NH52 213 aa20.95■□□□□ 0.94
MSX2-201ENST00000239243 TMCC2O75069 709 aa20.95■□□□□ 0.94
MSX2-201ENST00000239243 CRABP1P29762 137 aa20.95■□□□□ 0.94
MSX2-201ENST00000239243 FAM205BPQ63HN1 556 aa20.95■□□□□ 0.94
MSX2-201ENST00000239243 C3orf33Q6P1S2 294 aa20.95■□□□□ 0.94
MSX2-201ENST00000239243 OR4K17Q8NGC6 315 aa20.95■□□□□ 0.94
MSX2-201ENST00000239243 FKBP2P26885 142 aaKnown RBP20.94■□□□□ 0.94
MSX2-201ENST00000239243 PSMB10P40306 273 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 TLE3Q04726 772 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 IDNKQ5T6J7 187 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 FAM27D1Q5T7N8 215 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 FRMD6Q96NE9 622 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 MFRPQ9BY79 579 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 B3GALT5Q9Y2C3 310 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 SPEGQ15772 3267 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 CENPBD1B2RD01 187 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 HPGDSO60760 199 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 ALOX5APP20292 161 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 ADH6P28332 368 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 EIF1P41567 113 aaKnown RBP20.94■□□□□ 0.94
MSX2-201ENST00000239243 SSR4P51571 173 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 YIF1BQ5BJH7 314 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 AGAP7PQ5VUJ5 663 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 SFXN4Q6P4A7 337 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 RAB11FIP2Q7L804 512 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 YIPF7Q8N8F6 280 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 FADS6Q8N9I5 356 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 SNRNP27Q8WVK2 155 aaKnown RBP20.94■□□□□ 0.94
MSX2-201ENST00000239243 TAAR9Q96RI9 348 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 ZNF281Q9Y2X9 895 aa20.94■□□□□ 0.94
MSX2-201ENST00000239243 SLC22A23A1A5C7 686 aa20.93■□□□□ 0.94
MSX2-201ENST00000239243 LIPT2A6NK58 231 aa20.93■□□□□ 0.94
MSX2-201ENST00000239243 ZNF879B4DU55 563 aa20.93■□□□□ 0.94
MSX2-201ENST00000239243 NPIPA5E9PKD4 350 aa20.93■□□□□ 0.94
MSX2-201ENST00000239243 FZD7O75084 574 aa20.93■□□□□ 0.94
MSX2-201ENST00000239243 AKR7A3O95154 331 aa20.93■□□□□ 0.94
MSX2-201ENST00000239243 DLGAP3O95886 979 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms