RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 SELENOPP49908 381 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 RPS6KA3P51812 740 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 GINS1Q14691 196 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 C4orf17Q53FE4 359 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 CARD17Q5XLA6 110 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 CCDC71Q8IV32 467 aaPredicted RBP24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 TMEM45BQ96B21 275 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 MBOAT4Q96T53 435 aa24.17■■□□□ 1.46
CHMP4B-201ENST00000217402 NPIPB13A6NJU9 1138 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 HSPB2A8KAH6 182 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 NPIPB4C9JG80 1138 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 AKAP8O43823 692 aaKnown RBP24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 CRHP06850 196 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 EDNRAP25101 427 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 CTSSP25774 331 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 ACVR1BP36896 505 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 PTGES3Q15185 160 aaKnown RBP24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 HSPB2Q16082 182 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 PGGHGQ32M88 737 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 SLC35F1Q5T1Q4 408 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 ARMC4Q5T2S8 1044 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 SLC27A4Q6P1M0 643 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 CCDC120Q96HB5 630 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 RCE1Q9Y256 329 aa24.16■■□□□ 1.46
CHMP4B-201ENST00000217402 ZNF726A6NNF4 738 aa24.15■■□□□ 1.46
CHMP4B-201ENST00000217402 SDHAP31040 664 aa24.15■■□□□ 1.46
CHMP4B-201ENST00000217402 RUNX1T1Q06455 604 aa24.15■■□□□ 1.46
CHMP4B-201ENST00000217402 CAMK2DQ13557 499 aa24.15■■□□□ 1.46
CHMP4B-201ENST00000217402 OR2M2Q96R28 347 aa24.15■■□□□ 1.46
CHMP4B-201ENST00000217402 SFXN3Q9BWM7 321 aa24.15■■□□□ 1.46
CHMP4B-201ENST00000217402 VCX3BQ9H321 246 aa24.15■■□□□ 1.46
CHMP4B-201ENST00000217402 DLGAP1O14490 977 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 GIPRP48546 466 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 MYBPC1Q00872 1141 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 KRR1Q13601 381 aaKnown RBP24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 MESTQ5EB52 335 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 GPR139Q6DWJ6 353 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 BTLAQ7Z6A9 289 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 ZNF100Q8IYN0 542 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 LNX2Q8N448 690 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 ARIH2OSQ8N7S6 290 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 OR6K3Q8NGY3 331 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 OR6X1Q8NH79 312 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 ZNF519Q8TB69 540 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 APH1AQ96BI3 265 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 PARPBPQ9NWS1 579 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 RNF6Q9Y252 685 aa24.14■■□□□ 1.46
CHMP4B-201ENST00000217402 IGHV3-9P01782 118 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 APEHP13798 732 aaKnown RBP24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 BMP5P22003 454 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 SMSP52788 366 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 ADORA2A-AS1P86434 159 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 SNCBQ16143 134 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 ACSM5Q6NUN0 579 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 TMEM123Q8N131 208 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 STARD4Q96DR4 205 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 ADAD1Q96M93 576 aaKnown RBP24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 SLC25A19Q9HC21 320 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 BAIAP2Q9UQB8 552 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 H7C1C5 153 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 XKRYO14609 159 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 ARPC3O15145 178 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 SMNDC1O75940 238 aaKnown RBP eCLIP24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 ZNF432O94892 652 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 HIST1H1CP16403 213 aaKnown RBP24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 LCN6P62502 163 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 CDK5Q00535 292 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 LGALS3BPQ08380 585 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 HDDC2Q7Z4H3 204 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 OR4K13Q8NH42 304 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 SLC25A44Q96H78 314 aaPredicted RBP24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 RDH12Q96NR8 316 aa24.13■■□□□ 1.45
CHMP4B-201ENST00000217402 ZAR1LA6NP61 321 aa24.12■■□□□ 1.45
CHMP4B-201ENST00000217402 ARHGEF9O43307 516 aa24.12■■□□□ 1.45
CHMP4B-201ENST00000217402 TXNDC12O95881 172 aa24.12■■□□□ 1.45
CHMP4B-201ENST00000217402 ACADSP16219 412 aa24.12■■□□□ 1.45
CHMP4B-201ENST00000217402 OPRM1P35372 400 aa24.12■■□□□ 1.45
CHMP4B-201ENST00000217402 AQP4P55087 323 aa24.12■■□□□ 1.45
CHMP4B-201ENST00000217402 SYT14Q8NB59 555 aa24.12■■□□□ 1.45
CHMP4B-201ENST00000217402 HDAC2Q92769 488 aaKnown RBP24.12■■□□□ 1.45
CHMP4B-201ENST00000217402 ZNF566Q969W8 418 aa24.12■■□□□ 1.45
CHMP4B-201ENST00000217402 GRIP2Q9C0E4 1043 aa24.12■■□□□ 1.45
CHMP4B-201ENST00000217402 PROCRQ9UNN8 238 aa24.12■■□□□ 1.45
CHMP4B-201ENST00000217402 MYO7BQ6PIF6 2116 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 A6NIZ1 184 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 IMPA2O14732 288 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 IDH3BO43837 385 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 SLC43A1O75387 559 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 TRMUO75648 421 aaKnown RBP24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 IGHG1P01857 330 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 GRK5P34947 590 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 CLRN1P58418 232 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 RAP1BP61224 184 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 RAP1AP62834 184 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 FAM205BPQ63HN1 556 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 JAZF1Q86VZ6 243 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 ZNF629Q9UEG4 869 aaPredicted RBP24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 PRSS50Q9UI38 385 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 SLC5A6Q9Y289 635 aa24.11■■□□□ 1.45
CHMP4B-201ENST00000217402 SLC2A10O95528 541 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms