RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SLC22A18ASQ8N1D0 253 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 THRSPQ92748 146 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 MOGAT1Q96PD6 335 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 TSSK2Q96PF2 358 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 GPR174Q9BXC1 333 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 COMMD4Q9H0A8 199 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 TCEAL2Q9H3H9 227 aaPredicted RBP12.1□□□□□ -0.47
SRP54-201ENST00000216774 CA10Q9NS85 328 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 TAS2R8Q9NYW2 309 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 GRHPRQ9UBQ7 328 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 LAMP5Q9UJQ1 280 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 PPIEQ9UNP9 301 aaKnown RBP12.1□□□□□ -0.47
SRP54-201ENST00000216774 TMEM14AQ9Y6G1 99 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 NUP210LQ5VU65 1888 aa12.1□□□□□ -0.47
SRP54-201ENST00000216774 A0A087WV48 116 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 OR6C65A6NJZ3 312 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 OR4C45A6NMZ5 311 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 C4orf47A7E2U8 309 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 H7C417 338 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 UBL4AP11441 157 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 ANXA7P20073 488 aaKnown RBP12.09□□□□□ -0.47
SRP54-201ENST00000216774 CSRP1P21291 193 aaKnown RBP12.09□□□□□ -0.47
SRP54-201ENST00000216774 NFYAP23511 347 aaPredicted RBP12.09□□□□□ -0.47
SRP54-201ENST00000216774 GALNSP34059 522 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 SOX2P48431 317 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 HSD17B7P56937 341 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 BTG2P78543 158 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 HHEXQ03014 270 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 COL13A1Q5TAT6 717 aaPredicted RBP12.09□□□□□ -0.47
SRP54-201ENST00000216774 FAM198BQ6UWH4 519 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 ZNF761Q86XN6 746 aaPredicted RBP12.09□□□□□ -0.47
SRP54-201ENST00000216774 ADGRG3Q86Y34 549 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 DNAAF1Q8NEP3 725 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 OR2G2Q8NGZ5 317 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 KLHL15Q96M94 604 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 PELOQ9BRX2 385 aaKnown RBP12.09□□□□□ -0.47
SRP54-201ENST00000216774 WDR76Q9H967 626 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 MTFP1Q9UDX5 166 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 STEAP1Q9UHE8 339 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 SPEF1Q9Y4P9 236 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 CIB4A0PJX0 185 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 PHYHO14832 338 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 RBBP9O75884 186 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 NSA2O95478 260 aaKnown RBP12.09□□□□□ -0.47
SRP54-201ENST00000216774 HPGDP15428 266 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 ITPKBP27987 946 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 MRPS21P82921 87 aaKnown RBP12.09□□□□□ -0.47
SRP54-201ENST00000216774 RASGEF1BQ0VAM2 473 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 HTR4Q13639 388 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 MFSD13AQ14CX5 517 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 RBMS2Q15434 407 aaKnown RBP12.09□□□□□ -0.47
SRP54-201ENST00000216774 NHLRC3Q5JS37 347 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 MED25Q71SY5 747 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 TAF8Q7Z7C8 310 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 AVL9Q8NBF6 648 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 GPR148Q8TDV2 347 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 ELMOD3Q96FG2 381 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 LPAR4Q99677 370 aa12.09□□□□□ -0.47
SRP54-201ENST00000216774 ZNF346Q9UL40 294 aaKnown RBP12.09□□□□□ -0.47
SRP54-201ENST00000216774 TRAV8-7A0A075B6U6 113 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 PRAMEF26H0Y7S4 382 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 L7N2F9 121 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 LINC01565O15544 149 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 CLPSP04118 112 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 CELA2BP08218 269 aaPredicted RBP12.08□□□□□ -0.48
SRP54-201ENST00000216774 CSF1P09603 554 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 PTHLHP12272 177 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 ZNF250P15622 560 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 CXCL2P19875 107 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 ALOX5APP20292 161 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 MAOAP21397 527 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 DLX5P56178 289 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 MAT1AQ00266 395 aaKnown RBP12.08□□□□□ -0.48
SRP54-201ENST00000216774 EGR4Q05215 589 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 CD226Q15762 336 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 SMUG1Q53HV7 270 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 MESTQ5EB52 335 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 FAAP20Q6NZ36 180 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 ANKRD16Q6P6B7 361 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 C3P1Q6ZMU1 363 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 SLC38A6Q8IZM9 456 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 ZNF676Q8N7Q3 588 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 OMA1Q96E52 524 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 SFXN2Q96NB2 322 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 TMEM106CQ9BVX2 250 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 CDCP1Q9H5V8 836 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 C12orf10Q9HB07 376 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 SRA1Q9HD15 236 aaKnown RBP12.08□□□□□ -0.48
SRP54-201ENST00000216774 IKZF2Q9UKS7 526 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 UBE2QL1A1L167 161 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 C10orf142B7Z368 130 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 DCTN6O00399 190 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 RENP00797 406 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 TFF2Q03403 129 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 RPL18Q07020 188 aaKnown RBP12.08□□□□□ -0.48
SRP54-201ENST00000216774 CCINQ13939 588 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 SERTAD2Q14140 314 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 ERV3-1Q14264 604 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 TMEM31Q5JXX7 168 aa12.08□□□□□ -0.48
SRP54-201ENST00000216774 EEF1A1P5Q5VTE0 462 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms