RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 TECTBQ96PL2 329 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 FAM234AQ9H0X4 552 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 HAO2Q9NYQ3 351 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 TRAPPC2LQ9UL33 140 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 A0A0U1RQK1 487 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 A0A1W2PQL4 384 aaPredicted RBP12.6□□□□□ -0.39
SIX4-201ENST00000216513 SHISA8B8ZZ34 492 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 TMPRSS11DO60235 418 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 OR2G6Q5TZ20 316 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 LRRN1Q6UXK5 716 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 OR7G2Q8NG99 324 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 OR2V1Q8NHB1 315 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 EVA1AQ9H8M9 152 aa12.6□□□□□ -0.39
SIX4-201ENST00000216513 CDX4O14627 284 aaPredicted RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 LCN1P31025 176 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 TRAV18A0A075B6X5 111 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 OR5H15A6NDH6 313 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 HMX3A6NHT5 357 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 GDF9O60383 454 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 SERPINA7P05543 415 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 TMIGD3P0DMS9 266 aaPredicted RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 ILKQ13418 452 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 TRAM1Q15629 374 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 GDPD3Q7L5L3 318 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 DND1Q8IYX4 353 aaKnown RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 SMAP2Q8WU79 429 aaPredicted RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 RRNAD1Q96FB5 475 aaKnown RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 SCP2D1Q9UJQ7 156 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 TRBV4-1A0A0J9YWV2 114 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 ZC3H12DA2A288 527 aaKnown RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 HPGDSO60760 199 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 RPA2P15927 270 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 MAB21L1Q13394 359 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 FHL5Q5TD97 284 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 GRPEL2Q8TAA5 225 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 TEX37Q96LM6 180 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 ALG8Q9BVK2 526 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 MAP1BP46821 2468 aaKnown RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 M0R082 166 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 IFNA7P01567 189 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 FAM69AQ5T7M9 428 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 ZNF322Q6U7Q0 402 aaPredicted RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 CD163Q86VB7 1156 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 ZNF417Q8TAU3 575 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 ZNF587Q96SQ5 575 aaPredicted RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 STACQ99469 402 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 SAP130Q9H0E3 1048 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 HIPK2Q9H2X6 1198 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 ESRP2Q9H6T0 727 aaKnown RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 GPR45Q9Y5Y3 372 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 SERTM1A2A2V5 107 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 UBFD1O14562 309 aaKnown RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 MTCP1P56278 107 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 SPOCK1Q08629 439 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 VEZF1Q14119 521 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 TGIF1Q15583 401 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 MRPL41Q8IXM3 137 aaKnown RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 OR6V1Q8N148 313 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 PACRGLQ8N7B6 248 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 OR10G3Q8NGC4 313 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 TRMT61AQ96FX7 289 aaKnown RBP12.59□□□□□ -0.39
SIX4-201ENST00000216513 ZNF649Q9BS31 505 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 SMIM3Q9BZL3 60 aa12.59□□□□□ -0.39
SIX4-201ENST00000216513 DLGAP1O14490 977 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 KCNK2O95069 426 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 MT-ND4P03905 459 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 ZNF169Q14929 603 aaPredicted RBP12.58□□□□□ -0.4
SIX4-201ENST00000216513 WDR74Q6RFH5 385 aaPredicted RBP12.58□□□□□ -0.4
SIX4-201ENST00000216513 CSNK2A3Q8NEV1 391 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 OR5D18Q8NGL1 313 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 UBE2FQ969M7 185 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 ERVMER34-1Q9H9K5 563 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 CYB5BO43169 146 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 LRRTM2O43300 516 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 PPIHO43447 177 aaKnown RBP12.58□□□□□ -0.4
SIX4-201ENST00000216513 FZD6O60353 706 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 PTPN6P29350 595 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 CLN3Q13286 438 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 GPR50Q13585 617 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 OR4K15Q8NH41 348 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 C22orf15Q8WYQ4 148 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 C4orf36Q96KX1 117 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 TUBA1CQ9BQE3 449 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 KCNN3Q9UGI6 736 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 C19orf53Q9UNZ5 99 aaPredicted RBP12.58□□□□□ -0.4
SIX4-201ENST00000216513 FUOMA2VDF0 154 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 FBP2O00757 339 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 SPINT1O43278 529 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 YES1P07947 543 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 GSTP1P09211 210 aaKnown RBP12.58□□□□□ -0.4
SIX4-201ENST00000216513 DSCR4P56555 118 aaPredicted RBP12.58□□□□□ -0.4
SIX4-201ENST00000216513 EIF5AP63241 154 aaKnown RBP12.58□□□□□ -0.4
SIX4-201ENST00000216513 ZNF367Q7RTV3 350 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 ZFP90Q8TF47 636 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 SLC39A7Q92504 469 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 UTP4Q969X6 686 aaKnown RBP12.58□□□□□ -0.4
SIX4-201ENST00000216513 B3GAT1Q9P2W7 334 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 NTNG1Q9Y2I2 539 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.58□□□□□ -0.4
SIX4-201ENST00000216513 LNP1A1A4G5 178 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms