RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 CDC42EP3Q9UKI2 254 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 RCE1Q9Y256 329 aa13.03□□□□□ -0.32
UPK3A-201ENST00000216211 IGKV1D-42A0A075B6H8 117 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 PRORSD1PA6NEY8 169 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 VWC2LB2RUY7 222 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 B9A039 149 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 RPL36A-HNRNPH2H7BZ11 118 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 NME4O00746 187 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 OR2T1O43869 369 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 TPST1O60507 370 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 FZD7O75084 574 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 IGLV1-44P01699 117 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 OR4A8P0C604 315 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 FAM157CP0CG43 387 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 HOXB1P14653 301 aaPredicted RBP13.02□□□□□ -0.33
UPK3A-201ENST00000216211 GRPRP30550 384 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 SLC7A2P52569 658 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 SH3BGRP55822 239 aaPredicted RBP13.02□□□□□ -0.33
UPK3A-201ENST00000216211 MS4A2Q01362 244 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 C1DQ13901 141 aaKnown RBP13.02□□□□□ -0.33
UPK3A-201ENST00000216211 TRIM25Q14258 630 aaKnown RBP13.02□□□□□ -0.33
UPK3A-201ENST00000216211 ADIPOQQ15848 244 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 CARTPTQ16568 116 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 CEACAM16Q2WEN9 425 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 C3orf36Q3SXR2 165 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 LRIF1Q5T3J3 769 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 FAM69AQ5T7M9 428 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 REEP3Q6NUK4 255 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 DHRS4L2Q6PKH6 230 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 DHDDSQ86SQ9 333 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 PHC2Q8IXK0 858 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 GPR137CQ8N3F9 429 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 LSMEM1Q8N8F7 131 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 RNF217Q8TC41 542 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 ASB9Q96DX5 294 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 PIMREGQ9BSJ6 248 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 S100A14Q9HCY8 104 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 TMEM160Q9NX00 188 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 CMTM6Q9NX76 183 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 VAPAQ9P0L0 249 aa13.02□□□□□ -0.33
UPK3A-201ENST00000216211 TRAV36DV7A0A075B6V5 113 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 ZNF503-AS2A6NEH8 195 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 SEC14L2O76054 403 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 IGKV3-15P01624 115 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 IDH3GP51553 393 aaPredicted RBP13.01□□□□□ -0.33
UPK3A-201ENST00000216211 CDK6Q00534 326 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 FLOT2Q14254 428 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 RCN1Q15293 331 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 ALG10BQ5I7T1 473 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 PHYHD1Q5SRE7 291 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 C5orf46Q6UWT4 87 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 H1FNTQ75WM6 255 aaPredicted RBP13.01□□□□□ -0.33
UPK3A-201ENST00000216211 ARIH2OSQ8N7S6 290 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 DNAJA4Q8WW22 397 aaPredicted RBP13.01□□□□□ -0.33
UPK3A-201ENST00000216211 FOXN4Q96NZ1 517 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 OR2M2Q96R28 347 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 SPATA5L1Q9BVQ7 753 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 BEX2Q9BXY8 128 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 IKZF5Q9H5V7 419 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 CRLF2Q9HC73 371 aa13.01□□□□□ -0.33
UPK3A-201ENST00000216211 TRBV5-3A0A0A0MS03 114 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 MS4A18H0YCH9 400 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 M0R3G1 203 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 NDUFS8O00217 210 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 TRAF3IP2O43734 574 aaPredicted RBP13□□□□□ -0.33
UPK3A-201ENST00000216211 LMX1BO60663 402 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 HLA-DOBP13765 273 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 CBR1P16152 277 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 PPIBP23284 216 aaKnown RBP13□□□□□ -0.33
UPK3A-201ENST00000216211 THBS4P35443 961 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 NR4A2P43354 598 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 CAPZA2P47755 286 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 HGFACQ04756 655 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 SLC34A1Q06495 639 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 NPRL3Q12980 569 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 SCARB2Q14108 478 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 EFNB3Q15768 340 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 MS4A18Q3C1V0 323 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 CARD17Q5XLA6 110 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 NANOGP8Q6NSW7 305 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 ULK3Q6PHR2 472 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 KRT73Q86Y46 540 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 TMEM123Q8N131 208 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 RNF148Q8N7C7 305 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 FAM169BQ8N8A8 192 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 PIK3C3Q8NEB9 887 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 ANKK1Q8NFD2 765 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 OR4F15Q8NGB8 312 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 OR8J3Q8NGG0 315 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 SLC47A1Q96FL8 570 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 CGREF1Q99674 301 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 WFDC6Q9BQY6 131 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 EMC6Q9BV81 110 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 SHARPINQ9H0F6 387 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 MUC13Q9H3R2 512 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 PLK3Q9H4B4 646 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 NANOGQ9H9S0 305 aa13□□□□□ -0.33
UPK3A-201ENST00000216211 MOV10Q9HCE1 1003 aaKnown RBP13□□□□□ -0.33
UPK3A-201ENST00000216211 TESQ9UGI8 421 aaKnown RBP13□□□□□ -0.33
UPK3A-201ENST00000216211 AP3M1Q9Y2T2 418 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms