RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 OR7A5Q15622 319 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 MOGAT2Q3SYC2 334 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 CD300LGQ6UXG3 332 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 OR14L1PQ8NHC6 308 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 LILRB1Q8NHL6 650 aaPredicted RBP9.68□□□□□ -0.86
VCL-201ENST00000211998 LPAR4Q99677 370 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 DOK1Q99704 481 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 ZFYVE21Q9BQ24 234 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 FTSJ1Q9UET6 329 aa9.68□□□□□ -0.86
VCL-201ENST00000211998 GDF2Q9UK05 429 aaPredicted RBP9.68□□□□□ -0.86
VCL-201ENST00000211998 MYADML2A6NDP7 307 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 TOX4O94842 621 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 OR2T7P0C7T2 308 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 PTGER1P34995 402 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 HOXA1P49639 335 aaPredicted RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 SFRP5Q5T4F7 317 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 DLEU7Q6UYE1 221 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 GPR137CQ8N3F9 429 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 COMMD1Q8N668 190 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 OR13C2Q8NGS9 318 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 OR2T27Q8NH04 317 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 TMEM106AQ96A25 262 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 POM121Q96HA1 1249 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 CABLES2Q9BTV7 478 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 GABARAPL1Q9H0R8 117 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 CA14Q9ULX7 337 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 TP53TG5Q9Y2B4 290 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 FAM96BQ9Y3D0 163 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 A0A0U1RQS6 177 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 ANKRD61A6NGH8 418 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 TMEM189-UBE2V1I3L0A0 370 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 SCGB2A1O75556 95 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 HNRNPA3P51991 378 aaKnown RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 GPR18Q14330 331 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 SLC14A2Q15849 920 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 GLYR1Q49A26 553 aaPredicted RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 YOD1Q5VVQ6 348 aaPredicted RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 Q6ZTK2 550 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 UHRF2Q96PU4 802 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 ATF6BQ99941 703 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 PARD6AQ9NPB6 346 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 GDE1Q9NZC3 331 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 MBLAC1A4D2B0 266 aaPredicted RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 SNRPGP15A8MWD9 76 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 ZNF195O14628 629 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 BCL2L11O43521 198 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 ANGPTL7O43827 346 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 LGI1O95970 557 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 CRABP1P29762 137 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 OPRD1P41143 372 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 PCBP4P57723 403 aaKnown RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 COL9A2Q14055 689 aaPredicted RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 TMEM31Q5JXX7 168 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 OR2AK2Q8NG84 335 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 ISG20Q96AZ6 181 aaKnown RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 WDR89Q96FK6 387 aaPredicted RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 WDR83Q9BRX9 315 aaKnown RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 PTDSS2Q9BVG9 487 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 PDLIM7Q9NR12 457 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 KCNIP1Q9NZI2 227 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 SLC35A3Q9Y2D2 325 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 CHST2Q9Y4C5 530 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 CHD2O14647 1828 aaKnown RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 XRCC3O43542 346 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 GATCO43716 136 aaKnown RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 JTBO76095 146 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 PDGFBP01127 241 aaPredicted RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 HPNP05981 417 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 VIPR2P41587 438 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 PSMB3P49720 205 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 HNF4GQ14541 408 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 KIAA0895LQ68EN5 471 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 RTL6Q6ICC9 239 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 TMEM25Q86YD3 366 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 RIMKLAQ8IXN7 391 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 PRR18Q8N4B5 295 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 NANOS1Q8WY41 292 aaKnown RBP9.67□□□□□ -0.86
VCL-201ENST00000211998 FAM3CQ92520 227 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 FOXN4Q96NZ1 517 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 CWH43Q9H720 699 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 ADAMTS5Q9UNA0 930 aa9.67□□□□□ -0.86
VCL-201ENST00000211998 RNASEK-C17orf49H0YIS7 233 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 CLN5O75503 358 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 PSMB6P28072 239 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 ARRB2P32121 409 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 NPY4RP50391 375 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 SYT14P1Q58G82 188 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 RPUSD3Q6P087 351 aaKnown RBP9.66□□□□□ -0.86
VCL-201ENST00000211998 LRRTM1Q86UE6 522 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 UEVLDQ8IX04 471 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 GPR119Q8TDV5 335 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 NEIL2Q969S2 332 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 RSRP1Q9BUV0 290 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 GOLGA4Q13439 2230 aaKnown RBP9.66□□□□□ -0.86
VCL-201ENST00000211998 ZNF354AO60765 605 aaPredicted RBP9.66□□□□□ -0.86
VCL-201ENST00000211998 PNMTP11086 282 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 ITGB7P26010 798 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 RPL29P47914 159 aaKnown RBP9.66□□□□□ -0.86
VCL-201ENST00000211998 NOVP48745 357 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 F2RL1P55085 397 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms