RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 SLC16A6O15403 523 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 ATG12O94817 140 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 ENPP1P22413 925 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 MEF2DQ14814 521 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 SLX4IPQ5VYV7 408 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 STEAP3Q658P3 488 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 ACSM5Q6NUN0 579 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 IDO2Q6ZQW0 420 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 ZFPM2Q8WW38 1151 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 RPP25Q9BUL9 199 aaKnown RBP17.33■□□□□ 0.37
MBD3-201ENST00000156825 METTL9Q9H1A3 318 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 NPFFR2Q9Y5X5 522 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 CABIN1Q9Y6J0 2220 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 ATG2BQ96BY7 2078 aa17.33■□□□□ 0.37
MBD3-201ENST00000156825 M0R082 166 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 TPOP07202 933 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 PCSK6P29122 969 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 SORDQ00796 357 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 ADPRMQ3LIE5 342 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 GLYATL3Q5SZD4 288 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 TMEM185AQ8NFB2 350 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 CGGBP1Q9UFW8 167 aaPredicted RBP17.33■□□□□ 0.36
MBD3-201ENST00000156825 MOKQ9UQ07 419 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 MRPS28Q9Y2Q9 187 aaKnown RBP17.33■□□□□ 0.36
MBD3-201ENST00000156825 ICE1Q9Y2F5 2266 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 NUP214P35658 2090 aaPredicted RBP17.33■□□□□ 0.36
MBD3-201ENST00000156825 GVINP1Q7Z2Y8 2422 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 LGI1O95970 557 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 TNFSF4P23510 183 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 CYB561P49447 251 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 TAS2R31P59538 309 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 NPSR1Q6W5P4 371 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 STEAP2Q8NFT2 490 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 STT3BQ8TCJ2 826 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 RAB3CQ96E17 227 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 PBDC1Q9BVG4 233 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 A0A1W2PNR3 127 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 DPM1O60762 260 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 RFPL3O75679 317 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 RAB40ALP0C0E4 278 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 NID1P14543 1247 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 OMGP23515 440 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 RAB40AQ8WXH6 277 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 S100PBPQ96BU1 408 aa17.33■□□□□ 0.36
MBD3-201ENST00000156825 PRAF2O60831 178 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 CHRNB1P11230 501 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 DLX5P56178 289 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 ZNF684Q5T5D7 378 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 THOC3Q96J01 351 aaKnown RBP17.32■□□□□ 0.36
MBD3-201ENST00000156825 OR5B12Q96R08 314 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 FBXL2Q9UKC9 423 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 LOXHD1Q8IVV2 1947 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 ZNF195O14628 629 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 MPEG1Q2M385 716 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 C19orf53Q9UNZ5 99 aaPredicted RBP17.32■□□□□ 0.36
MBD3-201ENST00000156825 TOGARAM1Q9Y4F4 1720 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 M0QYG6 137 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 YBX1P67809 324 aaKnown RBP17.32■□□□□ 0.36
MBD3-201ENST00000156825 GABREP78334 506 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 GK2Q14410 553 aaPredicted RBP17.32■□□□□ 0.36
MBD3-201ENST00000156825 ELAVL1Q15717 326 aaKnown RBP17.32■□□□□ 0.36
MBD3-201ENST00000156825 PRTGQ2VWP7 1150 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 MANEAQ5SRI9 462 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 CORO6Q6QEF8 472 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 FAM71CQ8NEG0 241 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 OLIG1Q8TAK6 271 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 SECTM1Q8WVN6 248 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 NXT1Q9UKK6 140 aaKnown RBP17.32■□□□□ 0.36
MBD3-201ENST00000156825 COL16A1Q07092 1604 aaPredicted RBP17.32■□□□□ 0.36
MBD3-201ENST00000156825 SURF4O15260 269 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 TK1P04183 234 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 CEACAM5P06731 702 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 TSFMP43897 325 aaKnown RBP17.32■□□□□ 0.36
MBD3-201ENST00000156825 SF3B4Q15427 424 aaKnown RBP eCLIP17.32■□□□□ 0.365e-6■■□□□ 12.2
MBD3-201ENST00000156825 UBE2NLQ5JXB2 153 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 SAXO2Q658L1 398 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 PAQR8Q8TEZ7 354 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 SEMA4CQ9C0C4 833 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 LYRM4Q9HD34 91 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 TRAPPC2LQ9UL33 140 aa17.32■□□□□ 0.36
MBD3-201ENST00000156825 TIMM8AO60220 97 aaPredicted RBP17.31■□□□□ 0.36
MBD3-201ENST00000156825 SYT14P1Q58G82 188 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 PRSS45Q7RTY3 260 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 MISPQ8IVT2 679 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 DUSP22Q9NRW4 184 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 RAB6AP20340 208 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 B4GALNT1Q00973 533 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 ZNF529Q6P280 563 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 CELF2-AS1Q8N7Q2 184 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 TSSK2Q96PF2 358 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 PIGQQ9BRB3 760 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 TSPAN10Q9H1Z9 355 aaPredicted RBP17.31■□□□□ 0.36
MBD3-201ENST00000156825 PCDHGA5Q9Y5G8 931 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 KLK4Q9Y5K2 254 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 CORINQ9Y5Q5 1042 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 C2CD4DB7Z1M9 353 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 B8ZZF3 427 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 EFSO43281 561 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 RFC3P40938 356 aa17.31■□□□□ 0.36
MBD3-201ENST00000156825 ALKBH1Q13686 389 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms