RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Dvl1P51141 695 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Emx1Q04742 257 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Rnf38Q8BI21 518 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tbl2Q9R099 442 aaKnown RBP11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Usp51B1AY15 661 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 PrkacaP05132 351 aaKnown RBP11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vwa5b2Q3UR50 1248 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 EgflamQ4VBE4 1017 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Znf32Q80V23 272 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 4922502D21RikQ8C634 189 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr820Q8VFU5 312 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr353Q8VGK0 311 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Lyrm7Q9DA03 104 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm9964E9Q9S5 144 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 5730507C01RikJ3QPX0 416 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Dpp4P28843 760 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Htr7P32304 448 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Scgb1a1Q06318 96 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Faap24Q8BHL6 221 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Dnajb1Q9QYJ3 340 aaKnown RBP11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Lcn11A2BHR2 178 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ccdc9bA3KGF9 545 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Sertad4A7DTG3 377 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1410E9PYK6 323 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm6576F6YTZ4 274 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vipr2P41588 437 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Slc35f3Q1LZI2 421 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tubal3Q3UX10 446 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 2610318N02RikQ80VT5 305 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 P2rx2Q8K3P1 485 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Slc2a10Q8VHD6 536 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Adh1P00329 375 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mdga1Q0PMG2 940 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1148Q7TR35 314 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Abhd11Q8K4F5 307 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Bcl7bQ921K9 202 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mien1Q9CQ86 115 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Abca3Q8R420 1704 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 2610044O15Rik8A0A087WRJ1 410 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 4930435E12RikA6X8Z9 381 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Nid1P10493 1245 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 NfyaP23708 346 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 PmchP56942 165 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ranbp3lQ6PDH4 491 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Ubqln4Q99NB8 596 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zfp616J3QN14 987 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 IfnabL7MTU6 190 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Rpl13aP19253 203 aaKnown RBP11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Acy1Q99JW2 408 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Obp1aQ9D3H2 163 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Stpg4Q9DAG5 247 aa11.16□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r94K7N6X3 305 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Muc13P19467 573 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Thyn1Q91YJ3 226 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Scgb3a2Q920H1 91 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr944Q9EQ91 311 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Chst4Q9R1I1 388 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm45711E0CXA2 391 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Esp36G3UZD8 160 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm11236J3QMS7 360 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 GzmdP11033 252 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Glt8d1Q6NSU3 371 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Slc22a27Q76M72 551 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 InavaQ7TN12 663 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr1196Q7TR14 314 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mrpl58Q8R035 206 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r225Q8R2A5 298 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 DhrsxQ8VBZ0 335 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr849Q8VFF6 312 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Wdr89Q9D0R9 386 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Raet1dQ9JI58 249 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cldn6Q9Z262 219 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r169L7N275 304 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Cox5aP12787 146 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Acot8P58137 320 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Tra2bP62996 288 aaKnown RBP11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 TrmoQ562D6 431 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 SypQ62277 314 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Adamtsl2Q7TSK7 957 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Prss34Q80UR4 318 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 SpartQ8R1X6 671 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Vmn1r28Q8R2C9 302 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Olfr649Q8VGW1 312 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 D10Jhu81eQ9D172 266 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 GatmQ9D964 423 aaKnown RBP11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Muc3E9PWP7 378 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Zfp758E9QAA1 583 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gabrb3P63080 473 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Taar8aQ5QD07 344 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Clvs2Q8BG92 327 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Mfsd11Q8BJ51 449 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Endod1Q8C522 501 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Bcl2l14Q9CPT0 328 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Uqcc2Q9CQY6 136 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Krba1Q6NXZ1 1043 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Kcmf1Q80UY2 381 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gstm7Q80W21 218 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Kcnk5Q9JK62 502 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Gm10800D3Z496 220 aa11.15□□□□□ -0.62
Trim56-201ENSMUST00000054384 Capns1O88456 269 aa11.15□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms