RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Lrrc3bQ8VCH9 259 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rpusd1Q8VCZ8 306 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr821Q8VG45 310 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Kcnj10Q9JM63 379 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Serinc1Q9QZI8 453 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Glp1rO35659 463 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ly6aP05533 134 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rab3aP63011 220 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cnrip1Q5M8N0 164 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr151Q60893 309 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Klhl9Q6ZPT1 617 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 LsampQ8BLK3 341 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Q8C784 167 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Vmn1r208Q8R275 308 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 RabepkQ8VCH5 380 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1351Q8VGU6 319 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Fitm1Q91V79 292 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 PolmQ9JIW4 496 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Dpp4P28843 760 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Eif4ebp2P70445 120 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Katnb1Q8BG40 658 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 C1qtnf12Q8R2Z0 308 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Nop16Q9CPT5 178 aaKnown RBP10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Lancl2Q9JJK2 450 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Znf207Q9JMD0 495 aaKnown RBP10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Clcf1Q9QZM3 225 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm5493S4R2D1 92 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr430E9Q5F1 317 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm20683H3BKJ1 410 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 FiglaO55208 194 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cfap161Q6P8Y0 303 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Kirrel2Q7TSU7 700 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Zfp9Q8BIS1 454 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm9999Q8C5Y2 53 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr985Q8VGB4 311 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cst14Q8VII3 130 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tmem269Q9D4Y8 254 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tex29Q9DA77 186 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Zfp300A2AE21 645 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm5519D3Z175 170 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Vmn2r60L7N2A1 853 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 P01679 107 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 PitpnbP53811 271 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm6760Q0ZNK3 87 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Lin28bQ45KJ6 247 aaKnown RBP10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 RflnbQ5SVD0 216 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Znf629Q6A085 867 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Chpt1Q8C025 398 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Il23rQ8K4B4 644 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Wif1Q9WUA1 379 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ccl27Q9Z1X0 120 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 PvrigA0A1B0GS01 234 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Smpd5D6MZJ6 483 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rdh16f1E9Q9P8 317 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ifi203O35368 408 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tgfb1P04202 390 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 VtnP29788 478 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 FauP35545 74 aaKnown RBP10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rab2aP53994 212 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Hoxd1Q01822 328 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cd53Q61451 219 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1417Q8VGJ6 315 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Lrrc26Q91W20 331 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Plpp7Q91WB2 271 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Lypd6bQ9D7F2 191 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 1700034I23RikQ9D9Q3 184 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Psma6Q9QUM9 246 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Plod2Q9R0B9 737 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Oasl2Q9Z2F2 508 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Dicer1Q8R418 1916 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Trav8n-2A0A075B633 112 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm3636E9Q5P1 227 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Aldh3b3J3QMK6 479 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rhox2hK7N6P1 191 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Srsf5O35326 269 aaKnown RBP10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Irs3O54718 495 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 F10O88947 481 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cox4i1P19783 169 aaKnown RBP10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 TP20293 436 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 FahP35505 419 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Vamp2P63044 116 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gramd2aQ3V3G7 320 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Dhrs13Q5SS80 376 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Nxph1Q61200 271 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1166Q7TR27 316 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Frmd6Q8C0V9 622 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slc22a12Q8CFZ5 553 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr883Q8VF64 309 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Wasf3Q8VHI6 501 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ctrb1Q9CR35 263 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tex33Q9D9J2 266 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm13102A2ASJ3 519 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tbxa2rP30987 341 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Eif1P48024 113 aaKnown RBP10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rab2bP59279 216 aaKnown RBP10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Adra1aP97718 466 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Vmn1r223Q5SSA0 361 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gas6Q61592 674 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 SrmsQ62270 496 aa10.94□□□□□ -0.66
Pcif1-201ENSMUST00000041643 OmgQ63912 440 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms