RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Mbtps1Q9WTZ2 1052 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Grcc10O35127 126 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Prkar1bP12849 381 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Defb41Q30KP6 65 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Patz1Q5NBY9 687 aaKnown RBP15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Scml4Q80VG1 408 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Plekho2Q8K124 495 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Nectin4Q8R007 508 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Zfp54E9PW05 585 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Rhox2hK7N6P1 191 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 SncaO55042 140 aaKnown RBP15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 4921517D22RikQ8CET0 269 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Lamp5Q9D387 280 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cfap161Q6P8Y0 303 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Neil1Q8K4Q6 389 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr734Q8VFT4 313 aa15.51■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Adh1P00329 375 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ifna9P09235 190 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cox5aP12787 146 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Nxt2Q3UNA4 142 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Zfp36l3Q5ISE2 725 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Rspry1Q8BVR6 576 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Dock8Q8C147 2100 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 1700029P11RikQ9CQ68 150 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Trem1Q9JKE2 230 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cops3O88543 423 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Hsd3b2P26149 373 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Pla2g7Q60963 440 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Hif1anQ8BLR9 349 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr353Q8VGK0 311 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ash2lQ91X20 623 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Snu13Q9D0T1 128 aaKnown RBP15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Fbxo17Q9QZM8 286 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ints1Q6P4S8 2195 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Vezf1Q5SXC4 518 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Tle1Q62440 770 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 McatQ8R3F5 381 aaKnown RBP15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 CthQ8VCN5 398 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ms4a4dQ99N05 225 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gm21797J3QNW5 180 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Emc8O70378 207 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Mtf1Q07243 675 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Tmprss7Q8BIK6 829 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Thap7Q8VCZ3 309 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Egln3Q91UZ4 239 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Mrgpra3Q91WW3 302 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Zfp69A2A761 587 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 PtgdsO09114 189 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ube2g2P60605 165 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Trim46Q7TNM2 759 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr32Q7TQZ0 308 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Creg2Q8BGC9 288 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Enpp6Q8BGN3 440 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Tmprss11gQ8BZ10 417 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Capns1O88456 269 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Kcnk2P97438 426 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Casp7P97864 303 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Kcnmb1Q8CAE3 191 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ffar2Q8VCK6 330 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 AldobQ91Y97 364 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Vmn1r52Q9EP79 309 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Prl3c1Q9QUN5 212 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gm10721J3QPJ9 223 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ptpn6P29351 595 aaKnown RBP15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Sh3bp2Q06649 559 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Pon2Q62086 354 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Extl1Q9JKV7 669 aa15.5■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr601A2RS33 314 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gm10800D3Z496 220 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Esp36G3UZD8 160 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Ces2fQ08ED5 561 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Tspan11Q9D1D1 253 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Nox4Q9JHI8 578 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 PollQ9QXE2 573 aaKnown RBP15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Wif1Q9WUA1 379 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Fcrl6A1YIY0 268 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Cfhr2Q4LDF6 332 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Vmn1r196Q5SVD5 301 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Pou4f3Q63955 338 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Katnb1Q8BG40 658 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 WacQ924H7 646 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Psmg2Q9EST4 264 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Decr2Q9WV68 292 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Clec4dQ9Z2H6 219 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Aadacl2B2RWD2 401 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gm15446D3Z5Y8 553 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Smpd5D6MZJ6 483 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Txnl1Q8CDN6 289 aaKnown RBP15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr551Q8VG23 315 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Obp1aQ9D3H2 163 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr573-ps1A0A1B0GRU2 297 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Olfr1247A2AT78 314 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Comtd1Q8BIG7 262 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Tspan33Q8R3S2 283 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gmpr2Q99L27 348 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Sntb1Q99L88 537 aaKnown RBP15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Q9DAD0 168 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 BC034090A0A087WP46 1202 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 Gm45713A0A1B0GS68 446 aa15.49■□□□□ 0.07
Ccdc88a-201ENSMUST00000040182 4930563M21RikA0A1L1SUT5 578 aa15.49■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 58.5 ms