RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Gm11634A0A1B0GSX1 172 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Wisp1O54775 367 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Ca10P61215 328 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Obox3Q3UT54 335 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Ppp5cQ60676 499 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Ubfd1Q78JW9 368 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Fbxw13Q8BI57 466 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Rab38Q8QZZ8 211 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Clint1Q99KN9 631 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Tmem218Q9CQ44 115 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Senp8Q9D2Z4 221 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gm45711E0CXA2 391 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gm6576F6YTZ4 274 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gm8281L7N235 204 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Kcns1O35173 497 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Slc2a9Q3T9X0 538 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Xkr7Q5GH64 580 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Repin1Q5U4E2 545 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 LaynQ8C351 381 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Rp1l1Q8CGM2 1859 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Plcz1Q8K4D7 647 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Exosc5Q9CRA8 235 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Scnn1gQ9WU39 655 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Pmm2Q9Z2M7 242 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Cyp4a30bA0A087WS15 508 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr585E9PXW4 318 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Csn1s2aQ02862 184 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr332Q5NC45 344 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Fam46cQ5SSF7 391 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Klhl6Q6V595 619 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr1219Q7TR04 311 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Bdh1Q80XN0 343 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Flrt2Q8BLU0 660 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Kbtbd11Q8BNW9 633 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Q8BPC6 396 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Commd2Q8BXC6 199 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Lrrn3Q8CBC6 707 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Casc3Q8K3W3 698 aaKnown RBP14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Sec14l4Q8R0F9 403 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr518Q8VEW1 333 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr569Q8VGZ2 314 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Eps8l3Q91WL0 600 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Mrgpra1Q91WW5 304 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Cdca4Q9CWM2 237 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Entpd4Q9DBT4 613 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Plxdc2Q9DC11 530 aa14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 MgaA2AWL7 3003 aaKnown RBP14.92□□□□□ -0.02
Trim28-201ENSMUST00000005705 Mfsd4b5E9PYY6 479 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 H2-M11F6U8V3 335 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Rarres1F6ZIS7 283 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 OpcmlG5E8G3 345 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Slc16a5G5E8K6 468 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gm21812J3QN84 227 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Cd48P18181 240 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Fut10Q5F2L2 481 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Muc19Q6JHY2 733 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 AasdhQ80WC9 1100 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Sdhaf2Q8C6I2 164 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Vmn1r59Q8R2B9 310 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 SelenosQ9BCZ4 190 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Q9CQT6 229 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 RlimQ9WTV7 600 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Pkd1l3Q2EG98 2201 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Zfp442A2AQA0 667 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 GmlE9PX31 176 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gm21797J3QNW5 180 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Dok2O70469 412 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 CfpP11680 464 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Nptx1Q62443 432 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 MdficQ8BX65 247 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr837Q8VFJ4 312 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Isg20Q9JL16 300 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Avpr1bQ9WU02 421 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Eci2Q9WUR2 391 aa14.91□□□□□ -0.02
Trim28-201ENSMUST00000005705 Zfp937A2ANU7 503 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Adamtsl5D3Z689 485 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Vmn2r101E9PZS9 857 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Cfl1P18760 166 aaKnown RBP14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 AcheP21836 614 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Gna13P27601 377 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Tbxa2rP30987 341 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Rfx3P48381 749 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Olfr1428Q0VDY1 314 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Hectd3Q3U487 861 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Fbxw16Q497Z0 464 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Heatr6Q6P1G0 1184 aaKnown RBP14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Lrit2Q6PFC5 549 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Npr2Q6VVW5 1047 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Creg2Q8BGC9 288 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 OacylQ8BML2 685 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Nfatc4Q8K120 901 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Rtn4ip1Q924D0 396 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Q9D4G1 230 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Prl8a8Q9DAS4 241 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Vmn1r56Q9EPS9 310 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 FastkQ9JIX9 511 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 6430628N08RikA0A0U1RQ45 177 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Cops3O88543 423 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 Sox7P40646 380 aa14.9□□□□□ -0.02
Trim28-201ENSMUST00000005705 PitpnbP53811 271 aa14.9□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms