RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Olfr1428Q0VDY1 314 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 KcnrgQ2TUM3 264 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Klf4Q60793 483 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 H2-M2Q6W9L1 343 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Abhd13Q80UX8 337 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Coro2bQ8BH44 480 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Thumpd1Q99J36 350 aaKnown RBP11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Tmem41aQ9D8U2 264 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Prl8a8Q9DAS4 241 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 NpvfQ9ESQ8 188 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Cfap46E9Q2C0 2641 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Dock11A2AF47 2073 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Gm45716A0A1B0GRQ0 93 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Gm609E9Q573 300 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 IapP24822 559 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Adamts8P57110 905 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Tmem69Q3KQJ0 245 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Them4Q3UUI3 230 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Prtn3Q61096 254 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Ablim3Q69ZX8 682 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 ApoolQ78IK4 265 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Bdh1Q80XN0 343 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Slco1a6Q99J94 670 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Dusp6Q9DBB1 381 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Olfr955Q9EQ97 314 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Lgi1Q9JIA1 557 aa11.81□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Scn2aA0A0J9YTW6 2006 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Trbc2A0A075B5J4 173 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Trbc1A0A0A6YWV4 173 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Zfp605E9QAH2 694 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 PrkacaP05132 351 aaKnown RBP11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 CfpP11680 464 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 AhrP30561 848 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Mbl2P41317 244 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Ccl9P51670 122 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Tgif1P70284 272 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 SlbpP97440 275 aaKnown RBP11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 McptlQ00356 246 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Bcl2a1cQ0P538 128 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Slc30a2Q2HJ10 371 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Orm3Q63805 206 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Zfp790Q80ZX2 779 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Slc30a8Q8BGG0 367 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 NarsQ8BP47 559 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Dusp15Q8R4V2 235 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Clec14aQ8VCP9 459 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Olfr215Q8VF82 310 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Olfr1504Q8VFQ4 315 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Olfr790Q8VGJ3 322 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Wdr6Q99ME2 1125 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 AspnQ99MQ4 373 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Raet1eQ9CZQ6 251 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Fam166aQ9D4K5 319 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Gm21854A0A087WNM4 232 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 EmdO08579 259 aaKnown RBP11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 UoxP25688 303 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Nkx2-6P43688 289 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Hnrnpa1P49312 320 aaKnown RBP11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Rap2bP61226 183 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 XkrxQ5GH68 449 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Nup62Q63850 526 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 RgmaQ6PCX7 454 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Comtd1Q8BIG7 262 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Eif2b1Q99LC8 305 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Actl11Q9D5V1 1207 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Sema6cQ9WTM3 931 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Fhl5Q9WTX7 284 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Gm10439A2AJU2 433 aaKnown RBP11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Gm14418A2ARR6 358 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Gm14322A2AW66 358 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Gm15114B1B0X6 433 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Mfsd4b5E9PYY6 479 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Olfr738L7N1X7 311 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Slc28a2O88627 660 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Acp2P24638 423 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Btg1P62325 171 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Fam219bQ14DQ1 197 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 AccslQ3UX83 580 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Cnrip1Q5M8N0 164 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Rcc2Q8BK67 520 aaKnown RBP11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Ctxn1Q8K129 82 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Fahd1Q8R0F8 227 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Mrgprb3Q91ZC1 312 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Camk2gQ923T9 529 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 DynapQ9D7M5 161 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 P2ry14Q9ESG6 338 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 CalcrlQ9R1W5 463 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Scnn1gQ9WU39 655 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 PtprfA2A8L5 1898 aa11.8□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Gm13283A0A087WPG5 182 aa11.79□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Il17dA0A0B4J1G4 205 aa11.79□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Slc38a6G3UVW3 457 aa11.79□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Prss39O70169 367 aa11.79□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Rab11bP46638 218 aa11.79□□□□□ -0.52
Clcn3-201ENSMUST00000004430 P2rx1P51576 399 aa11.79□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Gpr55Q3UJF0 327 aa11.79□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Il10raQ61727 575 aa11.79□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Grm7Q68ED2 915 aa11.79□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Olfr857Q7TRF7 309 aa11.79□□□□□ -0.52
Clcn3-201ENSMUST00000004430 Creg2Q8BGC9 288 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms