RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 WFDC11Q8NEX6 87 aa13.16□□□□□ -0.3
PHGDH-231ENST00000641939 SMAP2Q8WU79 429 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-231ENST00000641939 PERPQ96FX8 193 aa13.16□□□□□ -0.3
PHGDH-231ENST00000641939 GSX2Q9BZM3 304 aa13.16□□□□□ -0.3
PHGDH-231ENST00000641939 GPR35Q9HC97 309 aa13.16□□□□□ -0.3
PHGDH-231ENST00000641939 MED29Q9NX70 200 aa13.16□□□□□ -0.3
PHGDH-231ENST00000641939 CISD1Q9NZ45 108 aaKnown RBP13.16□□□□□ -0.3
PHGDH-231ENST00000641939 ZNF229Q9UJW7 825 aa13.16□□□□□ -0.3
PHGDH-231ENST00000641939 LAMP3Q9UQV4 416 aa13.16□□□□□ -0.3
PHGDH-231ENST00000641939 SLC35F4A4IF30 521 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 C11orf98E9PRG8 122 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 DYNC1I1O14576 645 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 SERPINI2O75830 405 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 MT-ND1P03886 318 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 HIST1H2ABP04908 130 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 DANCRP0C864 163 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 THRBP10828 461 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 PAX1P15863 534 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 PTH2RP49190 550 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 UBE2NP61088 152 aaKnown RBP13.15□□□□□ -0.3
PHGDH-231ENST00000641939 ZP4Q12836 540 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 Q5PR19 223 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 SLC22A25Q6T423 547 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 HIST3H2AQ7L7L0 130 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 PIGWQ7Z7B1 504 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 VTCN1Q7Z7D3 282 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 C20orf196Q8IYI0 205 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 DEPDC4Q8N2C3 294 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 MAGEE2Q8TD90 523 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-231ENST00000641939 BCL2L2Q92843 193 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-231ENST00000641939 HIST1H2ACQ93077 130 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 TXNDC15Q96J42 360 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 LRR1Q96L50 414 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 HS6ST2Q96MM7 605 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 KCTD14Q9BQ13 255 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-231ENST00000641939 EMC6Q9BV81 110 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 MEPEQ9NQ76 525 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-231ENST00000641939 TAS2R5Q9NYW4 299 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 ABCD2Q9UBJ2 740 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 ARL2BPQ9Y2Y0 163 aa13.15□□□□□ -0.3
PHGDH-231ENST00000641939 A0A096LPE4 126 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 ARPC4-TTLL3A0A0A6YYG9 625 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 A0A1W2PPZ6 126 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 ZNF726A6NNF4 738 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 RNF13O43567 381 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 ZNF682O95780 498 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 SOD3P08294 240 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 ASAH2BP0C7U1 165 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 UMPSP11172 480 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 HOXB1P14653 301 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-231ENST00000641939 PAX7P23759 505 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 IFNA8P32881 189 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 UGT2B15P54855 530 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 RPS4XP62701 263 aaKnown RBP13.14□□□□□ -0.31
PHGDH-231ENST00000641939 ARF1P84077 181 aaKnown RBP13.14□□□□□ -0.31
PHGDH-231ENST00000641939 SPOCK1Q08629 439 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 CEACAM16Q2WEN9 425 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 PGGHGQ32M88 737 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 CARD17Q5XLA6 110 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 PRSS57Q6UWY2 283 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 CBLL1Q75N03 491 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 SLC46A3Q7Z3Q1 461 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 LRRC17Q8N6Y2 441 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 PFN4Q8NHR9 129 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 TMEM255BQ8WV15 326 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 TMEM239Q8WW34 195 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 PRRC1Q96M27 445 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 NELFAQ9H3P2 528 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 CRLF2Q9HC73 371 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 SPAG4Q9NPE6 437 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 B3GAT2Q9NPZ5 323 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 ZNF701Q9NV72 531 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-231ENST00000641939 FAIMQ9NVQ4 179 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 POU2F3Q9UKI9 436 aa13.14□□□□□ -0.31
PHGDH-231ENST00000641939 TLN2Q9Y4G6 2542 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 M0R3G1 203 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 OR7A10O76100 309 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 SERPINA1P01009 418 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 IGF2P01344 180 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 IFNW1P05000 195 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 IFNGR1P15260 489 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 ST3GAL3Q11203 375 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 CAMK2DQ13557 499 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 IFI44LQ53G44 452 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 PHYHD1Q5SRE7 291 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 SLC35D2Q76EJ3 337 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 NANOGNBQ7Z5D8 188 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 YTHDF3Q7Z739 585 aaKnown RBP13.13□□□□□ -0.31
PHGDH-231ENST00000641939 GEMIN6Q8WXD5 167 aaKnown RBP13.13□□□□□ -0.31
PHGDH-231ENST00000641939 FAM162AQ96A26 154 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 ZNF837Q96EG3 531 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-231ENST00000641939 SGTBQ96EQ0 304 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 LRRC37BQ96QE4 947 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 MOV10Q9HCE1 1003 aaKnown RBP13.13□□□□□ -0.31
PHGDH-231ENST00000641939 DLL4Q9NR61 685 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 ADA2Q9NZK5 511 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 A4GNTQ9UNA3 340 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 MED31Q9Y3C7 131 aa13.13□□□□□ -0.31
PHGDH-231ENST00000641939 ZNF99A8MXY4 864 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-231ENST00000641939 E7EQL1 145 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms