RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 P2RX1P51575 399 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 AKR1C2P52895 323 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 TGIF1Q15583 401 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SLC25A35Q3KQZ1 300 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 HAGHLQ6PII5 290 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 TMEM64Q6YI46 380 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF554Q86TJ5 538 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 S100A16Q96FQ6 103 aaKnown RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SYT3Q9BQG1 590 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF701Q9NV72 531 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 MALT1Q9UDY8 824 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 A0A1B0GUL6 1792 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 CXorf51AA0A1B0GTR3 108 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 CNOT4O95628 575 aaKnown RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 OR8G3PP0DMU2 310 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 CD22P20273 847 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 DRD5P21918 477 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ROR2Q01974 943 aaKnown RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 POU4F2Q12837 409 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 DAG1Q14118 895 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 GPR176Q14439 515 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 CPZQ66K79 652 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 OR52E2Q8NGJ4 325 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 TCEAL2Q9H3H9 227 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 PIGMQ9H3S5 423 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 HDGFL3Q9Y3E1 203 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SMAD9O15198 467 aaKnown RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ARHGEF15O94989 841 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 HOXA6P31267 233 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 RPL5P46777 297 aaKnown RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SCN5AQ14524 2016 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ANKRD22Q5VYY1 191 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 CMTM1Q8IZ96 169 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 PQLC3Q8N755 202 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 OR8H1Q8NGG4 311 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 OR8B3Q8NGG8 313 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 BPIFA2Q96DR5 249 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF317Q96PQ6 595 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 OR8B2Q96RD0 313 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 MBOAT4Q96T53 435 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 RTL8AQ9BWD3 113 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 POTEKPQ9BYX7 375 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 NMUR2Q9GZQ4 415 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SCPEP1Q9HB40 452 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 HIF3AQ9Y2N7 669 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 MED13LQ71F56 2210 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 TMED7-TICAM2A0A0A6YYA0 188 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 UBL3O95164 117 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 NCS1P62166 190 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 NPY5RQ15761 445 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 NEDD8Q15843 81 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SPANXN4Q5MJ08 99 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 CLVS1Q8IUQ0 354 aaPredicted RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ELMOD2Q8IZ81 293 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 DAZAP1Q96EP5 407 aaKnown RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF251Q9BRH9 671 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 BTBD10Q9BSF8 475 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 EGLN3Q9H6Z9 239 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SMCO4Q9NRQ5 59 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 METRNQ9UJH8 293 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 TMED7Q9Y3B3 224 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 MAB21L2Q9Y586 359 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 B4DXG7 233 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 H7BYZ3 331 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SULT1C2O00338 296 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SLC22A2O15244 555 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 CDC14BO60729 498 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 TRMUO75648 421 aaKnown RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 PPP5CP53041 499 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SLC35B1P78383 322 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SLC25A3Q00325 362 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 TLE1Q04724 770 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 EIF2B1Q14232 305 aaKnown RBP4.61□□□□□ -1.67
SCN1A-218ENST00000640036 PPA1Q15181 289 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 CHRFAM7AQ494W8 412 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 NXNL2Q5VZ03 156 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ACSM5Q6NUN0 579 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ABHD17CQ6PCB6 329 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 LINC01465Q8N7H1 131 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 WFDC5Q8TCV5 224 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 PERPQ96FX8 193 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 DPAGT1Q9H3H5 408 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 HES4Q9HCC6 221 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 CYSLTR2Q9NS75 346 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 UFSP2Q9NUQ7 469 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 CHRNA9Q9UGM1 479 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 MEGF11A6BM72 1044 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 RNF212BA8MTL3 300 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 C9orf172C9J069 976 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 EFSO43281 561 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 SPRY3O43610 288 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 PRAMEF4O60810 478 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 TXNDC12O95881 172 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 RAB40ALP0C0E4 278 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 ACP1P24666 158 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 TGM4P49221 684 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 GDF10P55107 478 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 BAMBIQ13145 260 aa4.61□□□□□ -1.67
SCN1A-218ENST00000640036 EDDM3AQ14507 147 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms