RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 SPP2Q13103 211 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 NME3Q13232 169 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 PARP15Q460N3 678 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 TEX30Q5JUR7 227 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 ANKRD22Q5VYY1 191 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 ZNF493Q6ZR52 646 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 LINC01561Q8N1V8 128 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 NOXO1Q8NFA2 376 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 STEAP2Q8NFT2 490 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 OR4K13Q8NH42 304 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 CNIH3Q8TBE1 160 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 M1APQ8TC57 530 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 BCL2L2Q92843 193 aaPredicted RBP-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 RPL3LQ92901 407 aaKnown RBP-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 EPSTI1Q96J88 318 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 LINC00574Q9H8X3 128 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 UGT1A7Q9HAW7 530 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 UGT1A10Q9HAW8 530 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 UGT1A8Q9HAW9 530 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 IL26Q9NPH9 171 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 C5AR2Q9P296 337 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 DDX19BQ9UMR2 479 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 PSG8Q9UQ74 426 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 ADGRB3O60242 1522 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 NPC1L1Q9UHC9 1359 aa-1.11□□□□□ -2.59
LMBR1-222ENST00000638959 ARID4BQ4LE39 1312 aaPredicted RBP-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 CLSPNQ9HAW4 1339 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 IGHV1OR15-9A0A0B4J2B8 117 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 IGHV1-3A0A0C4DH29 117 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 ANKRD30BLA7E2S9 258 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 HIP1O00291 1037 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 DCTN6O00399 190 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 UGT2B17O75795 530 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 STAMBPO95630 424 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 CDS2O95674 445 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 STARD3NLO95772 234 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 GPX1P07203 203 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 KLK3P07288 261 aaPredicted RBP-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 KRT13P13646 458 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 CCNG1P51959 295 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 PPP5CP53041 499 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 ATXN3P54252 364 aaPredicted RBP-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 PLCXD2Q0VAA5 305 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 KRTAP25-1Q3LHN0 102 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 PRSS54Q6PEW0 395 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 SLC16A13Q7RTY0 426 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 SIAH3Q8IW03 269 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 PRSS58Q8IYP2 241 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 TTLQ8NG68 377 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 ITCHQ96J02 903 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 ZNF681Q96N22 645 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 TGM7Q96PF1 710 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 NDUFAF3Q9BU61 184 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 CCDC68Q9H2F9 335 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 OR52D1Q9H346 318 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 RANBP3Q9H6Z4 567 aaPredicted RBP-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 GPN2Q9H9Y4 310 aaPredicted RBP-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 RNF6Q9Y252 685 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 U3KQK5 164 aa-1.12□□□□□ -2.59
LMBR1-222ENST00000638959 NCOR2Q9Y618 2525 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 NSG1A0A0A6YYJ2 146 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 F5H6K3 240 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 DDX39AO00148 427 aaKnown RBP-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 SLC30A4O14863 429 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 TTI1O43156 1089 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 IGLV3-25P01717 112 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 RFC4P35249 363 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 MAGEA4P43358 317 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 ATP1B3P54709 279 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 KLRC3Q07444 240 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 CEBPEQ15744 281 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 KYNUQ16719 465 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 LRIT3Q3SXY7 679 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 FAHD2BQ6P2I3 314 aaPredicted RBP-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 C16orf87Q6PH81 154 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 AFTPHQ6ULP2 937 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 CCDC83Q8IWF9 413 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 ZFP41Q8N8Y5 198 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 OTUB2Q96DC9 234 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 FAHD2AQ96GK7 314 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 PAGE5Q96GU1 130 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 ZNF514Q96K75 400 aaPredicted RBP-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 C12orf42Q96LP6 360 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 OR2V2Q96R30 315 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 SLC38A10Q9HBR0 1119 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 EXOSC4Q9NPD3 245 aaKnown RBP-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 PFDN4Q9NQP4 134 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 DDX18Q9NVP1 670 aaKnown RBP-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 KCNIP1Q9NZI2 227 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 XCL2Q9UBD3 114 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 CYTH4Q9UIA0 394 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 STAP1Q9ULZ2 295 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 OARD1Q9Y530 152 aa-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 LRP1Q07954 4544 aaKnown RBP-1.13□□□□□ -2.59
LMBR1-222ENST00000638959 CRB1P82279 1406 aa-1.14□□□□□ -2.59
LMBR1-222ENST00000638959 TRGV2A0A075B6R0 118 aa-1.14□□□□□ -2.59
LMBR1-222ENST00000638959 C13orf42A0A1B0GVH6 325 aa-1.14□□□□□ -2.59
LMBR1-222ENST00000638959 FAM74A7A6NL05 159 aa-1.14□□□□□ -2.59
LMBR1-222ENST00000638959 A8MXE2 369 aa-1.14□□□□□ -2.59
LMBR1-222ENST00000638959 PRAMEF26H0Y7S4 382 aa-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms