RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 ESR2Q92731 530 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 CDX2Q99626 313 aaPredicted RBP1.51□□□□□ -2.17
CCDC7-211ENST00000638889 ZNF416Q9BWM5 594 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 RSPH9Q9H1X1 276 aaPredicted RBP1.51□□□□□ -2.17
CCDC7-211ENST00000638889 RPP21Q9H633 154 aaKnown RBP1.51□□□□□ -2.17
CCDC7-211ENST00000638889 ZNF355PQ9NSJ1 428 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 SPATA7Q9P0W8 599 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 PCSK1NQ9UHG2 260 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 CD84Q9UIB8 345 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 DOCK9Q9BZ29 2069 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 WDR62O43379 1518 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 GPRASP1Q5JY77 1395 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 BRWD3Q6RI45 1802 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 TCRBV9S1A1TA0A576 114 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 ZNF233A6NK53 670 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 INS-IGF2F8WCM5 200 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 H0YHG0 523 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 RGS16O15492 202 aaPredicted RBP1.5□□□□□ -2.17
CCDC7-211ENST00000638889 SRP72O76094 671 aaKnown RBP1.5□□□□□ -2.17
CCDC7-211ENST00000638889 MPZL1O95297 269 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 DIRAS3O95661 229 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 OXSR1O95747 527 aaPredicted RBP1.5□□□□□ -2.17
CCDC7-211ENST00000638889 AP2A1O95782 977 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 SMIM10L1P0DMW3 83 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 CASP4P49662 377 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 MEF2BQ02080 365 aaPredicted RBP1.5□□□□□ -2.17
CCDC7-211ENST00000638889 SELPLGQ14242 412 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 TTLL9Q3SXZ7 439 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 CALHM3Q86XJ0 350 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 ZNF573Q86YE8 665 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 ARL10Q8N8L6 244 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 UFD1Q92890 307 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 SMIM10Q96HG1 83 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 WFIKKN1Q96NZ8 548 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 FOXC2Q99958 501 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 CHAC1Q9BUX1 264 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 GBA3Q9H227 469 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 RWDD1Q9H446 243 aaPredicted RBP1.5□□□□□ -2.17
CCDC7-211ENST00000638889 GIN1Q9NXP7 522 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 ACTR3BQ9P1U1 418 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 MMP17Q9ULZ9 603 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 CABIN1Q9Y6J0 2220 aa1.5□□□□□ -2.17
CCDC7-211ENST00000638889 VAMP5O95183 116 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 PRPS2P11908 318 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 IL12AP29459 219 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 CA8P35219 290 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 MESDQ14696 234 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 DUSP7Q16829 419 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 ZBED5Q49AG3 693 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 ZNF684Q5T5D7 378 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 CNSTQ6PJW8 725 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 LINC00173Q6ZV60 143 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 CCDC50Q8IVM0 306 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 ZDHHC21Q8IVQ6 265 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 PIANPQ8IYJ0 282 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 OSR2Q8N2R0 312 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 FAM133AQ8N9E0 248 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 ACOT4Q8N9L9 421 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 FNDC5Q8NAU1 212 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 SYT14Q8NB59 555 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 IPMKQ8NFU5 416 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 OR52H1Q8NGJ2 320 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 OR10G4Q8NGN3 311 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 OR10T2Q8NGX3 314 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 RGP1Q92546 391 aaPredicted RBP1.49□□□□□ -2.17
CCDC7-211ENST00000638889 PDXPQ96GD0 296 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 LINC00597Q9H2U6 94 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 LY9Q9HBG7 655 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 CHRNA9Q9UGM1 479 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 RPH3ALQ9UNE2 315 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 MEMO1Q9Y316 297 aa1.49□□□□□ -2.17
CCDC7-211ENST00000638889 GPATCH8Q9UKJ3 1502 aaKnown RBP1.49□□□□□ -2.17
CCDC7-211ENST00000638889 CEMIPQ8WUJ3 1361 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 CCDC182A6NF36 153 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 A8MUI8 341 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 A8MXQ7 604 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 HSD17B6O14756 317 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 RRP8O43159 456 aaKnown RBP1.48□□□□□ -2.17
CCDC7-211ENST00000638889 ATP5LO75964 103 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 LINC00869P0C866 280 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 UBTFL1P0CB47 393 aaPredicted RBP1.48□□□□□ -2.17
CCDC7-211ENST00000638889 TCN2P20062 427 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 HMGB2P26583 209 aaKnown RBP1.48□□□□□ -2.17
CCDC7-211ENST00000638889 SOX6P35712 828 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 QARSP47897 775 aaKnown RBP1.48□□□□□ -2.17
CCDC7-211ENST00000638889 NCBP2P52298 156 aaKnown RBP eCLIP1.48□□□□□ -2.17
CCDC7-211ENST00000638889 ESRRGP62508 458 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 RAP1AP62834 184 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 ERVK-25P63136 954 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 SLC7A9P82251 487 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 SYCNQ0VAF6 134 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 AQP6Q13520 282 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 USH1GQ495M9 461 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 C10orf120Q5SQS8 335 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 BRD3OSQ6XYD6 125 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 WDR86Q86TI4 376 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 TRIM69Q86WT6 500 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 MAIP1Q8WWC4 291 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 UBE2E3Q969T4 207 aa1.48□□□□□ -2.17
CCDC7-211ENST00000638889 TGM7Q96PF1 710 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms