RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 SPATA21Q7Z572 469 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 KRT73Q86Y46 540 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 UEVLDQ8IX04 471 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 ZNF540Q8NDQ6 660 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 SLC47A1Q96FL8 570 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 C7orf26Q96N11 449 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 ANKRD27Q96NW4 1050 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 DOK1Q99704 481 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 WFDC6Q9BQY6 131 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 SOX7Q9BT81 388 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 SPATA5L1Q9BVQ7 753 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 NOX3Q9HBY0 568 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 SLC52A3Q9NQ40 469 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 CCDC167Q9P0B6 97 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 TESQ9UGI8 421 aaKnown RBP14.59□□□□□ -0.07
SMN2-216ENST00000638794 FBXO9Q9UK97 447 aaPredicted RBP14.59□□□□□ -0.07
SMN2-216ENST00000638794 USP22Q9UPT9 525 aa14.59□□□□□ -0.07
SMN2-216ENST00000638794 A0A087WUJ7 227 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 TRBV5-3A0A0A0MS03 114 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 A0A0B4J2E0 115 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 A0A1B0GX12 115 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 TMEM129A0AVI4 362 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 TGDSO95455 350 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 STAMBPO95630 424 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 DAOP14920 347 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 PPIBP23284 216 aaKnown RBP14.58□□□□□ -0.08
SMN2-216ENST00000638794 AQP1P29972 269 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 IDH3AP50213 366 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 SNTB2Q13425 540 aaKnown RBP14.58□□□□□ -0.08
SMN2-216ENST00000638794 SCARB2Q14108 478 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 WDFY1Q8IWB7 410 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 CCDC36Q8IYA8 594 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 C20orf196Q8IYI0 205 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 RNF217Q8TC41 542 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 SLC41A3Q96GZ6 507 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 EMC6Q9BV81 110 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 SLCO1B3Q9NPD5 702 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 SELENONQ9NZV5 590 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 CORINQ9Y5Q5 1042 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 GMEB1Q9Y692 573 aa14.58□□□□□ -0.08
SMN2-216ENST00000638794 SH3PXD2BA1X283 911 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 LRP5LA4QPB2 252 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 VSTM5A8MXK1 200 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 TPST2O60704 377 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 TGFAP01135 160 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 HLA-HP01893 362 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 BGLAPP02818 100 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 IGFBP1P08833 259 aaPredicted RBP14.57□□□□□ -0.08
SMN2-216ENST00000638794 SLC6A2P23975 617 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 GIFP27352 417 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 THBS2P35442 1172 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 SRSF2Q01130 221 aaKnown RBP14.57□□□□□ -0.08
SMN2-216ENST00000638794 POU3F1Q03052 451 aaPredicted RBP14.57□□□□□ -0.08
SMN2-216ENST00000638794 DAG1Q14118 895 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 MFSD13AQ14CX5 517 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 OR1Q1Q15612 314 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 ADRM1Q16186 407 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 BEND6Q5SZJ8 279 aaPredicted RBP14.57□□□□□ -0.08
SMN2-216ENST00000638794 KRT80Q6KB66 452 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 CDK20Q8IZL9 346 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 SCAIQ8N9R8 606 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 IL17RDQ8NFM7 739 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 OR6S1Q8NH40 331 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 NEU4Q8WWR8 484 aaPredicted RBP14.57□□□□□ -0.08
SMN2-216ENST00000638794 MS4A3Q96HJ5 214 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 TXNDC15Q96J42 360 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 MOGAT1Q96PD6 335 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 EPYCQ99645 322 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 TMEM38AQ9H6F2 299 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 TMEM27Q9HBJ8 222 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 MED29Q9NX70 200 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 B3GNT2Q9NY97 397 aa14.57□□□□□ -0.08
SMN2-216ENST00000638794 PRORSD1PA6NEY8 169 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 LRRN3E7EW58 273 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 ERLIN1O75477 346 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 ERCC1P07992 297 aaPredicted RBP14.56□□□□□ -0.08
SMN2-216ENST00000638794 GPX2P18283 190 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 CDH12P55289 794 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 PUDPQ08623 228 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 PMS2P3Q13401 168 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 NHLRC1Q6VVB1 395 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 ARMC8Q8IUR7 673 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 LRRC8CQ8TDW0 803 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 CKAP2Q8WWK9 683 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 LRR1Q96L50 414 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 ZNF607Q96SK3 696 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 CCDC28BQ9BUN5 200 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 ASPNQ9BXN1 380 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 DYNLRB1Q9NP97 96 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 MRPL39Q9NYK5 338 aaKnown RBP14.56□□□□□ -0.08
SMN2-216ENST00000638794 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.56□□□□□ -0.08
SMN2-216ENST00000638794 SLC13A4Q9UKG4 626 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 CORO2BQ9UQ03 480 aa14.56□□□□□ -0.08
SMN2-216ENST00000638794 EVPLLA8MZ36 301 aa14.55□□□□□ -0.08
SMN2-216ENST00000638794 LILRA1O75019 489 aa14.55□□□□□ -0.08
SMN2-216ENST00000638794 SERPINB7O75635 380 aa14.55□□□□□ -0.08
SMN2-216ENST00000638794 ADRA2AP08913 450 aa14.55□□□□□ -0.08
SMN2-216ENST00000638794 CD79AP11912 226 aa14.55□□□□□ -0.08
SMN2-216ENST00000638794 B4GALT1P15291 398 aa14.55□□□□□ -0.08
SMN2-216ENST00000638794 HNF1AP20823 631 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms