RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 ELMOD3Q96FG2 381 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 REG4Q9BYZ8 158 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 MED9Q9NWA0 146 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 LRIT1Q9P2V4 623 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 HIF3AQ9Y2N7 669 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 SLC6A5Q9Y345 797 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 CHD9Q3L8U1 2897 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 IGKV1D-42A0A075B6H8 117 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 OR2M5A3KFT3 312 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 FAM171A2A8MVW0 826 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 L7N2F9 121 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 RPP14O95059 124 aaKnown RBP18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 HRGP04196 525 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 ADRA2CP18825 462 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 ANXA7P20073 488 aaKnown RBP18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 RPS15P62841 145 aaKnown RBP18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 HTR4Q13639 388 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 CBFBQ13951 182 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 LIPNQ5VXI9 398 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 C3P1Q6ZMU1 363 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 KANSL1Q7Z3B3 1105 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 EXD3Q8N9H8 876 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 OR4C3Q8NH37 302 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 SFXN2Q96NB2 322 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 DZANK1Q9NVP4 752 aa18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 MRM2Q9UI43 246 aaKnown RBP18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 ARHGEF17Q96PE2 2063 aaPredicted RBP18.33■□□□□ 0.53
SYNGAP1-227ENST00000638142 TMEM72A0PK05 275 aa18.33■□□□□ 0.52
SYNGAP1-227ENST00000638142 CD14P08571 375 aa18.33■□□□□ 0.52
SYNGAP1-227ENST00000638142 CXCL2P19875 107 aa18.33■□□□□ 0.52
SYNGAP1-227ENST00000638142 FAAP20Q6NZ36 180 aa18.33■□□□□ 0.52
SYNGAP1-227ENST00000638142 FAM122BQ7Z309 247 aa18.33■□□□□ 0.52
SYNGAP1-227ENST00000638142 LRRTM1Q86UE6 522 aa18.33■□□□□ 0.52
SYNGAP1-227ENST00000638142 LIPHQ8WWY8 451 aa18.33■□□□□ 0.52
SYNGAP1-227ENST00000638142 ZNF578Q96N58 590 aaPredicted RBP18.33■□□□□ 0.52
SYNGAP1-227ENST00000638142 TGFBR3LH3BV60 316 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 GLSO94925 669 aaPredicted RBP18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 CT45A8P0DMV1 189 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 CT45A9P0DMV2 189 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 PTHLHP12272 177 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 NAT1P18440 290 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 NFYAP23511 347 aaPredicted RBP18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 FAUP35544 74 aaKnown RBP18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 AQP2P41181 271 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 UBE2IP63279 158 aaKnown RBP18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 CT45A2Q5DJT8 189 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 PARM1Q6UWI2 310 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 OOSP2Q86WS3 158 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 BCORP1Q8N888 145 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 FGF14Q92915 247 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 ADAD1Q96M93 576 aaKnown RBP18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 GPR174Q9BXC1 333 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 FRRS1LQ9P0K9 344 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 OR10H1Q9Y4A9 318 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 KCNMB2Q9Y691 235 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 MFSD2BA6NFX1 497 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 OR6C65A6NJZ3 312 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 ELOA3DA6NLF2 546 aaPredicted RBP18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 BLOC1S5-TXNDC5H3BN57 136 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 HCRTR1O43613 425 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 ZNF432O94892 652 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 ABHD16AO95870 558 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 PNMTP11086 282 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 ELOA3BQ3SY89 546 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 ARHGEF39Q8N4T4 335 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 DNAAF1Q8NEP3 725 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 ELOA3Q8NG57 546 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 HMGB4Q8WW32 186 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 AIFM2Q9BRQ8 373 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 SDHAF2Q9NX18 166 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 MRPS33Q9Y291 106 aaKnown RBP18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 KLHDC2Q9Y2U9 406 aa18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 KIAA0100Q14667 2235 aaKnown RBP18.32■□□□□ 0.52
SYNGAP1-227ENST00000638142 A0A087WV48 116 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 CA3P07451 260 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 RNH1P13489 461 aaKnown RBP18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 ATF4P18848 351 aaPredicted RBP18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 SDHAP31040 664 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 SOX2P48431 317 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 MAP2K6P52564 334 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 YPEL5P62699 121 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 IGLV3-21P80748 117 aaPredicted RBP18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 NNATQ16517 81 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 ZNF74Q16587 644 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 TMPRSS12Q86WS5 348 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 ZNF595Q8IYB9 648 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 LRRC75AQ8NAA5 344 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 LSM14AQ8ND56 463 aaKnown RBP18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 CCDC74AQ96AQ1 378 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 KLHL15Q96M94 604 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 ANXA2P2A6NMY6 339 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 KLF8O95600 359 aaPredicted RBP18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 ANXA2P07355 339 aaKnown RBP18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 GPR3P46089 330 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 WBP2NLQ6ICG8 309 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 FAM122CQ6P4D5 195 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 CDC20BQ86Y33 519 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 GLB1L2Q8IW92 636 aa18.31■□□□□ 0.52
SYNGAP1-227ENST00000638142 TSSK2Q96PF2 358 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms