RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 ACKR1Q16570 336 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 RNFT1Q5M7Z0 435 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 ARMC4Q5T2S8 1044 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 FAM205BPQ63HN1 556 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 NHLRC1Q6VVB1 395 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 AHSA2Q719I0 299 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 ADCK1Q86TW2 530 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 GGNQ86UU5 652 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 STX19Q8N4C7 294 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 SVOPQ8N4V2 548 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 CYB561A3Q8NBI2 242 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 LSM14AQ8ND56 463 aaKnown RBP10.54□□□□□ -0.72
CLN6-223ENST00000637823 SDR9C7Q8NEX9 313 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 BBS1Q8NFJ9 593 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 OR2V1Q8NHB1 315 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 NEIL3Q8TAT5 605 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 ZNF519Q8TB69 540 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 SGCDQ92629 289 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 ABTB1Q969K4 478 aaPredicted RBP10.54□□□□□ -0.72
CLN6-223ENST00000637823 ADGRG7Q96K78 797 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 SIGLEC11Q96RL6 698 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 NMNAT3Q96T66 252 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 TEAD3Q99594 435 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 RHNO1Q9BSD3 238 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 NMNAT2Q9BZQ4 307 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 CCDC90BQ9GZT6 254 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 DEFB127Q9H1M4 99 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 SLC6A15Q9H2J7 730 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 LDAHQ9H6V9 325 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 MED20Q9H944 212 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 VCX3AQ9NNX9 186 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 PCDHGB1Q9Y5G3 927 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 A0A087WV48 116 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 OR6C68A6NDL8 312 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 SLC22A31A6NKX4 558 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 NPIPA5E9PKD4 350 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 EIF1AYO14602 144 aaKnown RBP10.53□□□□□ -0.72
CLN6-223ENST00000637823 AHCYL1O43865 530 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 BCL10O95999 233 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 PLGP00747 810 aaPredicted RBP10.53□□□□□ -0.72
CLN6-223ENST00000637823 MT-ND2P03891 347 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 ITGB2P05107 769 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 TFAP2AP05549 437 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 STSP08842 583 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 HLA-DOBP13765 273 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 JUNBP17275 347 aaPredicted RBP10.53□□□□□ -0.72
CLN6-223ENST00000637823 ENPP1P22413 925 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 SLC2A5P22732 501 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 SUCLG1P53597 346 aaKnown RBP10.53□□□□□ -0.72
CLN6-223ENST00000637823 C1DQ13901 141 aaKnown RBP10.53□□□□□ -0.72
CLN6-223ENST00000637823 MESTQ5EB52 335 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 SLC35D3Q5M8T2 416 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 VASNQ6EMK4 673 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 RPUSD3Q6P087 351 aaKnown RBP10.53□□□□□ -0.72
CLN6-223ENST00000637823 NIPAL3Q6P499 406 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 LEG1Q6P5S2 330 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 Q6ZS92 163 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 KCTD8Q6ZWB6 473 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 SLC35D2Q76EJ3 337 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 HDDC2Q7Z4H3 204 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 UEVLDQ8IX04 471 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 KDM8Q8N371 416 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 MEIOBQ8N635 442 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 RNFT2Q96EX2 444 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 TMEM80Q96HE8 168 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 HCAR1Q9BXC0 346 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 CDCA4Q9BXL8 241 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 FGF20Q9NP95 211 aaPredicted RBP10.53□□□□□ -0.72
CLN6-223ENST00000637823 HAO2Q9NYQ3 351 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 B3GAT1Q9P2W7 334 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 NPIPA1Q9UND3 350 aa10.53□□□□□ -0.72
CLN6-223ENST00000637823 EXOGQ9Y2C4 368 aaKnown RBP10.53□□□□□ -0.72
CLN6-223ENST00000637823 FRYQ5TBA9 3013 aa10.52□□□□□ -0.72
CLN6-223ENST00000637823 PTPRQQ9UMZ3 2332 aa10.52□□□□□ -0.72
CLN6-223ENST00000637823 DMXL2Q8TDJ6 3036 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 TRGV5A0A0B4J1U4 118 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 PRSS37A4D1T9 235 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 ZNF814B7Z6K7 855 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 TFECO14948 347 aaPredicted RBP10.52□□□□□ -0.73
CLN6-223ENST00000637823 ARHGEF9O43307 516 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 CXCL13O43927 109 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 SERPINI2O75830 405 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 RAB36O95755 333 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 FADS2O95864 444 aaKnown RBP10.52□□□□□ -0.73
CLN6-223ENST00000637823 IGHG3P01860 377 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 PDGFAP04085 211 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 IFNGR1P15260 489 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 ZNF708P17019 499 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 ZNF24P17028 368 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 ZNF43P17038 809 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 DCKP27707 260 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 ALDH3B2P48448 385 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 CLDN15P56746 228 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 CLDN18P56856 261 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 RPS3AP61247 264 aaKnown RBP10.52□□□□□ -0.73
CLN6-223ENST00000637823 PMP22Q01453 160 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 POU3F1Q03052 451 aaPredicted RBP10.52□□□□□ -0.73
CLN6-223ENST00000637823 MVKQ03426 396 aa10.52□□□□□ -0.73
CLN6-223ENST00000637823 EMX1Q04741 257 aaPredicted RBP10.52□□□□□ -0.73
CLN6-223ENST00000637823 PON3Q15166 354 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms