RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 NR2C2APQ86WQ0 139 aa14.1□□□□□ -0.15
CLN8-209ENST00000635970 MS4A15Q8N5U1 240 aa14.1□□□□□ -0.15
CLN8-209ENST00000635970 OR56B4Q8NH76 319 aa14.1□□□□□ -0.15
CLN8-209ENST00000635970 EXTL1Q92935 676 aa14.1□□□□□ -0.15
CLN8-209ENST00000635970 SLC38A1Q9H2H9 487 aa14.1□□□□□ -0.15
CLN8-209ENST00000635970 RASD1Q9Y272 281 aa14.1□□□□□ -0.15
CLN8-209ENST00000635970 CACNA1BQ00975 2339 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 GLOD5A6NK44 160 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 DUXAA6NLW8 204 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 CPSF4LA6NMK7 179 aaKnown RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 GSTZ1O43708 216 aaPredicted RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 PRAF2O60831 178 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 TMEM127O75204 238 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 STX11O75558 287 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 SERPINA3P01011 423 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 SAGP10523 405 aaPredicted RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 TFPIP10646 304 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 UBL4AP11441 157 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 PRKAG1P54619 331 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 TNFRSF17Q02223 184 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 CAMK2DQ13557 499 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 TMEM205Q6UW68 189 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 PLEKHM3Q6ZWE6 761 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 KRT74Q7RTS7 529 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 CPOQ8IVL8 374 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 RNF113BQ8IZP6 322 aaKnown RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 OR11G2Q8NGC1 345 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 OR51G2Q8NGK0 314 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 TRMT10AQ8TBZ6 339 aaKnown RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 PTCHD1Q96NR3 888 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 ABHD1Q96SE0 405 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 CACNG6Q9BXT2 260 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 CACYBPQ9HB71 228 aaKnown RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 HINT3Q9NQE9 182 aaKnown RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 CTPS2Q9NRF8 586 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 LYARQ9NX58 379 aaKnown RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 PRELID1Q9Y255 219 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 CLDN16Q9Y5I7 305 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 NPTNQ9Y639 398 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 SMG1Q96Q15 3661 aaKnown RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 TRAV1-2A0A0B4J238 106 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 A0A1W2PR48 441 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 DAPL1A0PJW8 107 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 SLC22A31A6NKX4 558 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 PGRMC2O15173 223 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 LDB3O75112 727 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 SC5DO75845 299 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 AIFM1O95831 613 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 CH25HO95992 272 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 H2AFB2P0C5Z0 115 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 SHC1P29353 583 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 MPIP34949 423 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 RGS8P57771 180 aaPredicted RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 ID2Q02363 134 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 INSL4Q14641 139 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 NSDHLQ15738 373 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 GSG1Q2KHT4 349 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 ANKRD37Q7Z713 158 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 TIGD4Q8IY51 512 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 SIRT6Q8N6T7 355 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 OR52L1Q8NGH7 329 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 ADAMTS18Q8TE60 1221 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 THAP4Q8WY91 577 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 SLC41A3Q96GZ6 507 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 ERMAPQ96PL5 475 aaPredicted RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 OR7D2Q96RA2 312 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 UBQLN3Q9H347 655 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 ISG20L2Q9H9L3 353 aaKnown RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 PRTFDC1Q9NRG1 225 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 FBXL4Q9UKA2 621 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 CAMK2AQ9UQM7 478 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 MRPS33Q9Y291 106 aaKnown RBP14.09□□□□□ -0.15
CLN8-209ENST00000635970 KCNMB2Q9Y691 235 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 SPACA6W5XKT8 324 aa14.09□□□□□ -0.15
CLN8-209ENST00000635970 TRAV6A0A075B6T7 132 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 IGKV3D-11A0A0A0MRZ8 115 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 I3L521 148 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 IGHEP01854 428 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 RRASP10301 218 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 COX6A1P12074 109 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 CSNK2A2P19784 350 aaPredicted RBP14.08□□□□□ -0.16
CLN8-209ENST00000635970 DNASE1P24855 282 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 MFSD13AQ14CX5 517 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 TBR1Q16650 682 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 NIPAL3Q6P499 406 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 LYPD4Q6UWN0 246 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 ADGRG3Q86Y34 549 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 NRMQ8IXM6 262 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 SLC2A12Q8TD20 617 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 METTL21AQ8WXB1 218 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 YIPF5Q969M3 257 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 MCHR1Q99705 422 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 ZCCHC4Q9H5U6 513 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 PRDM9Q9NQV7 894 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 MAB21L2Q9Y586 359 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 DOCK10Q96BY6 2186 aa14.08□□□□□ -0.16
CLN8-209ENST00000635970 LRRN3E7EW58 273 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 PEX12O00623 359 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 GPR171O14626 319 aa14.07□□□□□ -0.16
CLN8-209ENST00000635970 TRHRP34981 398 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms