RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 OR56B1Q8NGI3 324 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 UTP4Q969X6 686 aaKnown RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 CNOT2Q9NZN8 540 aaKnown RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 CD300AQ9UGN4 299 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 MRPS28Q9Y2Q9 187 aaKnown RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 PCDHGA5Q9Y5G8 931 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 KIAA1217Q5T5P2 1943 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 K7EPK0 472 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 HCRTR1O43613 425 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 ADAM23O75077 832 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 NDUFB7P17568 137 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 IVDP26440 423 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 SERPINF1P36955 418 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 TSPAN31Q12999 210 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 SEMA3BQ13214 749 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 POU4F3Q15319 338 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 ACTBL2Q562R1 376 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 C5orf46Q6UWT4 87 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 OR5AS1Q8N127 324 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 FAM71E2Q8N5Q1 922 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 ADAMTS14Q8WXS8 1223 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 AGPAT4Q9NRZ5 378 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 SLC22A23A1A5C7 686 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 SHISA7A6NL88 538 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 CT45A6P0DMU7 189 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 CT45A5P0DMU8 189 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 CT45A7P0DMV0 189 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 CT45A8P0DMV1 189 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 CT45A9P0DMV2 189 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 MAKP20794 623 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 GABREP78334 506 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 CT45A2Q5DJT8 189 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 CT45A1Q5HYN5 189 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF468Q5VIY5 522 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-211ENST00000629427 IL34Q6ZMJ4 242 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 Q6ZTK2 550 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 CT45A3Q8NHU0 189 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 TMIGD2Q96BF3 282 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 SSUH2Q9Y2M2 353 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 PRAMEF25A6NGN4 478 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 FAM166BA8MTA8 275 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 LCMT2O60294 686 aaKnown RBP10.87□□□□□ -0.67
SHPRH-211ENST00000629427 OR2G6Q5TZ20 316 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 FRMPD2BQ6IN97 320 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 MBOAT2Q6ZWT7 520 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 NXPE3Q969Y0 559 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 INTS12Q96CB8 462 aaKnown RBP10.87□□□□□ -0.67
SHPRH-211ENST00000629427 EGLN1Q9GZT9 426 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 SAGE1Q9NXZ1 904 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF705GA8MUZ8 300 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-211ENST00000629427 PMP2P02689 132 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 OR8U8P0C7N1 319 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 ATXN1LP0C7T5 689 aaKnown RBP10.87□□□□□ -0.67
SHPRH-211ENST00000629427 RPA2P15927 270 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 CST5P28325 142 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-211ENST00000629427 KCNAB1Q14722 419 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 RPL22L1Q6P5R6 122 aaKnown RBP10.87□□□□□ -0.67
SHPRH-211ENST00000629427 PARM1Q6UWI2 310 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 SLC43A2Q8N370 569 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 GOT1L1Q8NHS2 421 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-211ENST00000629427 CENPOQ9BU64 300 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 CNTNAP3Q9BZ76 1288 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 WASH6PQ9NQA3 447 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 MOKQ9UQ07 419 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 PIGLQ9Y2B2 252 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 PRELID3BQ9Y3B1 194 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 PUS1Q9Y606 427 aaKnown RBP eCLIP10.87□□□□□ -0.67
SHPRH-211ENST00000629427 C4AP0C0L4 1744 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 A0A1B0GX78 115 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 PRRG2O14669 202 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 DEGS1O15121 323 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 NFYAP23511 347 aaPredicted RBP10.87□□□□□ -0.67
SHPRH-211ENST00000629427 SLC1A3P43003 542 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 TPMTP51580 245 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 GPLD1P80108 840 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 CLVS2Q5SYC1 327 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 PIWIL3Q7Z3Z3 882 aaKnown RBP10.87□□□□□ -0.67
SHPRH-211ENST00000629427 DEFB123Q8N688 67 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 C1QTNF6Q9BXI9 259 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 NOX4Q9NPH5 578 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 LUZP4Q9P127 313 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 ATP23Q9Y6H3 246 aa10.87□□□□□ -0.67
SHPRH-211ENST00000629427 P2RY10O00398 339 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 DVL1O14640 695 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 NSA2O95478 260 aaKnown RBP10.86□□□□□ -0.67
SHPRH-211ENST00000629427 GABRA5P31644 462 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 DVL1P1P54792 670 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-211ENST00000629427 CLDN12P56749 244 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 OR8G1Q15617 311 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 C2orf76Q3KRA6 126 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF767PQ75MW2 155 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 SLC46A3Q7Z3Q1 461 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 NOXA1Q86UR1 476 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 SLC29A1Q99808 456 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 DEFB127Q9H1M4 99 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 OR2T7P0C7T2 308 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 C21orf33P30042 268 aaPredicted RBP10.86□□□□□ -0.67
SHPRH-211ENST00000629427 HBG1P69891 147 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 HBG2P69892 147 aa10.86□□□□□ -0.67
SHPRH-211ENST00000629427 PLA2G7Q13093 441 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms