RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 PAMR1Q6UXH9 720 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 RINLQ6ZS11 566 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 TMPRSS11FQ6ZWK6 438 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 MBOAT2Q6ZWT7 520 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 TRPM8Q7Z2W7 1104 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 PIWIL3Q7Z3Z3 882 aaKnown RBP7.24□□□□□ -1.25
NEK3-209ENST00000618856 CDH24Q86UP0 819 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 UEVLDQ8IX04 471 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 FAM169BQ8N8A8 192 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 LRRC75AQ8NAA5 344 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 OR1K1Q8NGR3 316 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 OR6X1Q8NH79 312 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 LILRB1Q8NHL6 650 aaPredicted RBP7.24□□□□□ -1.25
NEK3-209ENST00000618856 SLC7A13Q8TCU3 470 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 ACOT11Q8WXI4 607 aaPredicted RBP7.24□□□□□ -1.25
NEK3-209ENST00000618856 NRGNQ92686 78 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 BCL2L2Q92843 193 aaPredicted RBP7.24□□□□□ -1.25
NEK3-209ENST00000618856 TXNDC15Q96J42 360 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 ADAD1Q96M93 576 aaKnown RBP7.24□□□□□ -1.25
NEK3-209ENST00000618856 MRPL13Q9BYD1 178 aaKnown RBP7.24□□□□□ -1.25
NEK3-209ENST00000618856 MUC13Q9H3R2 512 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 LIME1Q9H400 295 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 NMNAT1Q9HAN9 279 aaPredicted RBP7.24□□□□□ -1.25
NEK3-209ENST00000618856 SLC17A5Q9NRA2 495 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 NPAP1Q9NZP6 1156 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 ACTR3BQ9P1U1 418 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 ST6GALNAC2Q9UJ37 374 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 MED31Q9Y3C7 131 aa7.24□□□□□ -1.25
NEK3-209ENST00000618856 PRR14LQ5THK1 2151 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 SLC35F4A4IF30 521 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 CENPBD1B2RD01 187 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 KPNA4O00629 521 aaPredicted RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 ACOT8O14734 319 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 AKAP8O43823 692 aaKnown RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 SLC43A1O75387 559 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 IGHMP01871 453 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 NQO1P15559 274 aaKnown RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 MAKP20794 623 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 ATP6V1B2P21281 511 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 PAX7P23759 505 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 IFNA8P32881 189 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 MAGEA2P43356 314 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 YAP1P46937 504 aaKnown RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 LIMS1P48059 325 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 HMGA2P52926 109 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 SH3BGRP55822 239 aaPredicted RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 MS4A2Q01362 244 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 POU3F1Q03052 451 aaPredicted RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 TGFBR3Q03167 851 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 C1DQ13901 141 aaKnown RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 TRIM25Q14258 630 aaKnown RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 PPA1Q15181 289 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 C3orf36Q3SXR2 165 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 MTX3Q5HYI7 312 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 ARMC4Q5T2S8 1044 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 LCN8Q6JVE9 175 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 PGM2L1Q6PCE3 622 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 FKBP9P1Q75LS8 142 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 ABHD12BQ7Z5M8 362 aaPredicted RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 UBE2J2Q8N2K1 259 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 RNF217Q8TC41 542 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 TMEM54Q969K7 222 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 SLC7A6OSQ96CW6 309 aaPredicted RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 NMD3Q96D46 503 aaKnown RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 BPIFA2Q96DR5 249 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 ZNF837Q96EG3 531 aaPredicted RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 SGTBQ96EQ0 304 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 PIK3IP1Q96FE7 263 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 PLPPR2Q96GM1 343 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 ZC3HAV1LQ96H79 300 aaKnown RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 NSMCE2Q96MF7 247 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 FOXC2Q99958 501 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 GPR35Q9HC97 309 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 NGBQ9NPG2 151 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 IL1RAPQ9NPH3 570 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 OBP2BQ9NPH6 170 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 MED29Q9NX70 200 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 RHCGQ9UBD6 479 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 CRNNQ9UBG3 495 aaPredicted RBP7.23□□□□□ -1.25
NEK3-209ENST00000618856 UPB1Q9UBR1 384 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 CREBBPQ92793 2442 aa7.23□□□□□ -1.25
NEK3-209ENST00000618856 ITPR3Q14573 2671 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 ZNF587BE7ETH6 402 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 CDC42EP2O14613 210 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 PIP5K1CO60331 668 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 TMCC2O75069 709 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 PTP4A3O75365 173 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 GMNNO75496 209 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 RAD51DO75771 328 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 UBOX5O94941 541 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 RAF1P04049 648 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 H1F0P07305 194 aaKnown RBP7.22□□□□□ -1.25
NEK3-209ENST00000618856 PGA4P0DJD7 388 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 PGA3P0DJD8 388 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 ADORA3P0DMS8 318 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 IFNGR1P15260 489 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 PAX1P15863 534 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 ZNF26P17031 533 aaPredicted RBP7.22□□□□□ -1.25
NEK3-209ENST00000618856 ITGA2P17301 1181 aa7.22□□□□□ -1.25
NEK3-209ENST00000618856 CD53P19397 219 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms