RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 COL16A1Q07092 1604 aaPredicted RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 DICER1Q9UPY3 1922 aaKnown RBP10.37□□□□□ -0.75
CCDC144B-208ENST00000618081 IGKV6D-21A0A0A0MT36 114 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 PVRP15151 417 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 RAP2BP61225 183 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 ADGRG5Q8IZF4 528 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 OR52A5Q9H2C5 316 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 DUSP13Q9UII6 198 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 MMACHCQ9Y4U1 282 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 GPRIN2O60269 458 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 ARAFP10398 606 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 DEFB103AP81534 67 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 LINC00696Q6ZRV3 163 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 OR8J2Q8NGG1 315 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 DUSP19Q8WTR2 217 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 GIMAP1Q8WWP7 306 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 ZC3HAV1LQ96H79 300 aaKnown RBP10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 TPPP3Q9BW30 176 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 RIMS4Q9H426 269 aaPredicted RBP10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 PRDM9Q9NQV7 894 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 OIP5O43482 229 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 SCGB1D1O95968 90 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 RPS17P08708 135 aaKnown RBP10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 SERPINF1P36955 418 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 BIDP55957 195 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 CEACAM7Q14002 265 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 PAGE3Q5JUK9 113 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 IL34Q6ZMJ4 242 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC15A4Q8N697 577 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC46A2Q9BY10 475 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF814B7Z6K7 855 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 NSA2O95478 260 aaKnown RBP10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 METTL15P1P0C7V9 234 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 GABRA4P48169 554 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 PPT1P50897 306 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 ADAMTSL4Q6UY14 1074 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 OR10X1Q8NGY0 326 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 OR10J5Q8NHC4 309 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 RLN3Q8WXF3 142 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 OR1E3Q8WZA6 343 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 ATF6BQ99941 703 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 PGAP2Q9UHJ9 254 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 CORINQ9Y5Q5 1042 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 TRAV36DV7A0A075B6V5 113 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF728P0DKX0 622 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 EDDM3BP56851 147 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 NKAIN2Q5VXU1 208 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 IDO2Q6ZQW0 420 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 C15orf54Q8N8G6 183 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 OR2M2Q96R28 347 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 MACROD1Q9BQ69 325 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 MMP28Q9H239 520 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 GABRPO00591 440 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 HOXD9P28356 352 aaPredicted RBP10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 GJC3Q8NFK1 279 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 EMG1Q92979 244 aaKnown RBP10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 ARRDC3Q96B67 414 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 HRASLS5Q96KN8 279 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 TOX2Q96NM4 488 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 TXNL4BQ9NX01 149 aaKnown RBP10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 FAM183AA6NL82 134 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 B4GAT1O43505 415 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 CSN1S1P47710 185 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC22A24Q8N4F4 322 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 OR4F15Q8NGB8 312 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 OR13C2Q8NGS9 318 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 SAT2Q96F10 170 aaPredicted RBP10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 NECAP2Q9NVZ3 263 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 GFOD1Q9NXC2 390 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 ATAD5Q96QE3 1844 aa10.36□□□□□ -0.75
CCDC144B-208ENST00000618081 TRAF3IP2O43734 574 aaPredicted RBP10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 HTR2CP28335 458 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 GMPRP36959 345 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 MFAP5Q13361 173 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 FJX1Q86VR8 437 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC35A4Q96G79 324 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 DCLRE1CQ96SD1 692 aaKnown RBP10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 ALG12Q9BV10 488 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 SHARPINQ9H0F6 387 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 FOCADQ5VW36 1801 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 PRRG2O14669 202 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 DEGS1O15121 323 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 PAX6P26367 422 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 OPRL1P41146 370 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 UBE2KP61086 200 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF266Q14584 549 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 SIAH1Q8IUQ4 282 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 KIRREL1Q96J84 757 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 ARPC4-TTLL3A0A0A6YYG9 625 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 MGST1P10620 155 aaKnown RBP10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 HOXD11P31277 338 aaPredicted RBP10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 CSNK1EP49674 416 aaKnown RBP10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 GABREP78334 506 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC9A3R2Q15599 337 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 RTL8BQ17RB0 113 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 HCFC2Q9Y5Z7 792 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 SERINC4A6NH21 518 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 GLCEO94923 617 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 LIPCP11150 499 aa10.35□□□□□ -0.75
CCDC144B-208ENST00000618081 HLA-FP30511 346 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms