RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 RTN4RQ9BZR6 473 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 NKIRAS2Q9NYR9 191 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 KLHL21Q9UJP4 597 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 ING1Q9UK53 422 aaPredicted RBP12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 PLCL2Q9UPR0 1127 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 CNTRLQ7Z7A1 2325 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 IGKV1D-42A0A075B6H8 117 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 EFCAB7A8K855 629 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 C11orf98E9PRG8 122 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 DCTN6O00399 190 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 BET1O15155 118 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 SC5DO75845 299 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 GIFP27352 417 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 HLA-DMAP28067 261 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 RBMS1P29558 406 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 DIO1P49895 249 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 ACTA2P62736 377 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 ACTG2P63267 376 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 FUT7Q11130 342 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 GAS6Q14393 721 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 HSD17B12Q53GQ0 312 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 VWA2Q5GFL6 755 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 C1orf189Q5VU69 101 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 BEST4Q8NFU0 473 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 LGALS14Q8TCE9 139 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 KTI12Q96EK9 354 aaPredicted RBP12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 ADAD1Q96M93 576 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 ZNF576Q9H609 170 aa12.66□□□□□ -0.38
CACNA1C-231ENST00000616390 ASCC3Q8N3C0 2202 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 A0A0A6YYJ9 748 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 TMEM150CB9EJG8 249 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 PLGP00747 810 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 GAAP10253 952 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 CD38P28907 300 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 HOXC12P31275 282 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 RPS11P62280 158 aaKnown RBP eCLIP12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 GRM7Q14831 915 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 ALG10Q5BKT4 473 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 PTPMT1Q8WUK0 201 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 TRIM63Q969Q1 353 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 SLC25A36Q96CQ1 311 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 ZC3HAV1LQ96H79 300 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 TMEM68Q96MH6 324 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 AUNIPQ9H7T9 357 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 NRIP3Q9NQ35 241 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 ING3Q9NXR8 418 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 ZNF222Q9UK12 451 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 DMDP11532 3685 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 OR2B3O76000 313 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 UTS2O95399 124 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 SERPINA3P01011 423 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 MT-ND4P03905 459 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 PTHLHP12272 177 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 ARL4DP49703 201 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 NANOS3P60323 173 aaKnown RBP12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 RRAS2P62070 204 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 KLHL26Q53HC5 615 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 EEF1A1P5Q5VTE0 462 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 SIAH3Q8IW03 269 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 POMGNT2Q8NAT1 580 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 OR6S1Q8NH40 331 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 OR8K3Q8NH51 312 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 OR14A16Q8NHC5 309 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 SLC2A12Q8TD20 617 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 UBQLN4Q9NRR5 601 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 IKZF2Q9UKS7 526 aa12.65□□□□□ -0.38
CACNA1C-231ENST00000616390 IGHV1OR15-9A0A0B4J2B8 117 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 PRSS44E7EML9 344 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 OGG1O15527 345 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 HCRTR2O43614 444 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 PPM1BO75688 479 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 ARL6IP5O75915 188 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 WISP1O95388 367 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 TRAPPC2P0DI81 140 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 TRAPPC2BP0DI82 140 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 SRMP19623 302 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 PTBP1P26599 531 aaKnown RBP eCLIP12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 SLC6A1P30531 599 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 PSMD4P55036 377 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 OR1D5P58170 312 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 RIN1Q13671 783 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 UBXN2BQ14CS0 331 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 TOMM34Q15785 309 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 C1QL3Q5VWW1 255 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 PYHIN1Q6K0P9 492 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 RPL22L1Q6P5R6 122 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 KANSL1Q7Z3B3 1105 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 GKN2Q86XP6 184 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 PIGKQ92643 395 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 KCTD12Q96CX2 325 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 FKRPQ9H9S5 495 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 RXFP3Q9NSD7 469 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 PRODH2Q9UF12 536 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 ICAM5Q9UMF0 924 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 RHPN2P1A8MT19 583 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 ZNF264O43296 627 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 ICOSLGO75144 302 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 SLC43A1O75387 559 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 CLPSP04118 112 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms