RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 REEP3Q6NUK4 255 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 DEF8Q6ZN54 512 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 HDXQ7Z353 690 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 PIWIL3Q7Z3Z3 882 aaKnown RBP6.28□□□□□ -1.4
TARDBP-216ENST00000614494 PXKQ7Z7A4 578 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 GLCCI1Q86VQ1 547 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 EPHX4Q8IUS5 362 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 CPEB3Q8NE35 698 aaKnown RBP6.28□□□□□ -1.4
TARDBP-216ENST00000614494 PNPT1Q8TCS8 783 aaKnown RBP6.28□□□□□ -1.4
TARDBP-216ENST00000614494 UBASH3BQ8TF42 649 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 CKAP2Q8WWK9 683 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 RASSF5Q8WWW0 418 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 STON2Q8WXE9 905 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 C1orf159Q96HA4 380 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 PAIP2Q9BPZ3 127 aaKnown RBP6.28□□□□□ -1.4
TARDBP-216ENST00000614494 TMEM43Q9BTV4 400 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 C19orf24Q9BVV8 132 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 C1QTNF6Q9BXI9 259 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 SLC19A3Q9BZV2 496 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 BPESC1Q9GZL8 116 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 LRMDAQ9H2I8 198 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 VIPAS39Q9H9C1 493 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 CHODLQ9H9P2 273 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 TMEM27Q9HBJ8 222 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 CRLF2Q9HC73 371 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 GPR35Q9HC97 309 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 RLIMQ9NVW2 624 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 SLC7A8Q9UHI5 535 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 GRIP1Q9Y3R0 1128 aa6.28□□□□□ -1.4
TARDBP-216ENST00000614494 FBN1P35555 2871 aaKnown RBP6.28□□□□□ -1.4
TARDBP-216ENST00000614494 IGHV2OR16-5A0A0B4J2B6 119 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 TMEM120BA0PK00 339 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 HTR3EA5X5Y0 456 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 ZNF726A6NNF4 738 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 CLIC1O00299 241 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 POLR3GO15318 223 aaPredicted RBP6.27□□□□□ -1.41
TARDBP-216ENST00000614494 AVPP01185 164 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 GSNP06396 782 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 GKN3PP0CG01 181 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 IFNGR1P15260 489 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 CREB1P16220 341 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 PTNP21246 168 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 NR4A1P22736 598 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 GATA3P23771 443 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 SLC6A2P23975 617 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 APEX1P27695 318 aaKnown RBP6.27□□□□□ -1.41
TARDBP-216ENST00000614494 GLRXP35754 106 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 CDKN2CP42773 168 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 RPS5P46782 204 aaKnown RBP6.27□□□□□ -1.41
TARDBP-216ENST00000614494 CAPZA2P47755 286 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 CDH15P55291 814 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 TMEM33P57088 247 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 RGS8P57771 180 aaPredicted RBP6.27□□□□□ -1.41
TARDBP-216ENST00000614494 ARF1P84077 181 aaKnown RBP6.27□□□□□ -1.41
TARDBP-216ENST00000614494 IL1RL1Q01638 556 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 PUDPQ08623 228 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 RBBP4Q09028 425 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 SNTB2Q13425 540 aaKnown RBP6.27□□□□□ -1.41
TARDBP-216ENST00000614494 CAMK2DQ13557 499 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 CR1LQ2VPA4 569 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 CEACAM16Q2WEN9 425 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 COX20Q5RI15 118 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 LRIF1Q5T3J3 769 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 GCNT6Q5T4J0 391 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 GKAP1Q5VSY0 366 aaPredicted RBP6.27□□□□□ -1.41
TARDBP-216ENST00000614494 ZNF613Q6PF04 617 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 SHQ1Q6PI26 577 aaKnown RBP6.27□□□□□ -1.41
TARDBP-216ENST00000614494 OLIG3Q7RTU3 272 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 SPATA21Q7Z572 469 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 SERPINA11Q86U17 422 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 VRK2Q86Y07 508 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 TMEM123Q8N131 208 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 OR1J2Q8NGS2 313 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 SNX33Q8WV41 574 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 MRPL24Q96A35 216 aaKnown RBP6.27□□□□□ -1.41
TARDBP-216ENST00000614494 SLC25A36Q96CQ1 311 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 SLC41A3Q96GZ6 507 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 TEX37Q96LM6 180 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 C7orf26Q96N11 449 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 FOXN4Q96NZ1 517 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 OR2M2Q96R28 347 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 DOK1Q99704 481 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 ULBP2Q9BZM5 246 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 TMEM38AQ9H6F2 299 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 NOX3Q9HBY0 568 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 MRPL39Q9NYK5 338 aaKnown RBP6.27□□□□□ -1.41
TARDBP-216ENST00000614494 CGGBP1Q9UFW8 167 aaPredicted RBP6.27□□□□□ -1.41
TARDBP-216ENST00000614494 TMEFF2Q9UIK5 374 aaPredicted RBP6.27□□□□□ -1.41
TARDBP-216ENST00000614494 ANGPT4Q9Y264 503 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 POFUT2Q9Y2G5 429 aa6.27□□□□□ -1.41
TARDBP-216ENST00000614494 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.27□□□□□ -1.411e-41■■■■■ 46.1
TARDBP-216ENST00000614494 A0A087WUJ7 227 aa6.26□□□□□ -1.41
TARDBP-216ENST00000614494 TRAV20A0A0B4J274 112 aa6.26□□□□□ -1.41
TARDBP-216ENST00000614494 IGHV4-61A0A0C4DH41 118 aa6.26□□□□□ -1.41
TARDBP-216ENST00000614494 M0R082 166 aa6.26□□□□□ -1.41
TARDBP-216ENST00000614494 TRAF3IP2O43734 574 aaPredicted RBP6.26□□□□□ -1.41
TARDBP-216ENST00000614494 UPK3AO75631 287 aa6.26□□□□□ -1.41
TARDBP-216ENST00000614494 OR6A2O95222 327 aa6.26□□□□□ -1.41
TARDBP-216ENST00000614494 SNAP29O95721 258 aa6.26□□□□□ -1.41
TARDBP-216ENST00000614494 ARAFP10398 606 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms