RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 ZNF443Q9Y2A4 671 aaPredicted RBP19.21■□□□□ 0.67
CBWD3-207ENST00000611426 CHST2Q9Y4C5 530 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 MAGED1Q9Y5V3 778 aaPredicted RBP19.21■□□□□ 0.67
CBWD3-207ENST00000611426 TLN2Q9Y4G6 2542 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 ABCA2Q9BZC7 2435 aa19.21■□□□□ 0.67
CBWD3-207ENST00000611426 DIRAS1O95057 198 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 THRBP10828 461 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 SMIM11AP58511 58 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 RPS4XP62701 263 aaKnown RBP19.2■□□□□ 0.66
CBWD3-207ENST00000611426 STK11Q15831 433 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 SLC36A3Q495N2 470 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 LIN52Q52LA3 116 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 OTUD3Q5T2D3 398 aaPredicted RBP19.2■□□□□ 0.66
CBWD3-207ENST00000611426 KDM4DQ6B0I6 523 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 GRINAQ7Z429 371 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 PIK3C3Q8NEB9 887 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 OR4D11Q8NGI4 311 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 MAGEE2Q8TD90 523 aaPredicted RBP19.2■□□□□ 0.66
CBWD3-207ENST00000611426 SLC35B4Q969S0 331 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 FBXW5Q969U6 566 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 EMC3Q9P0I2 261 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 CHRNA9Q9UGM1 479 aa19.2■□□□□ 0.66
CBWD3-207ENST00000611426 TMEFF2Q9UIK5 374 aaPredicted RBP19.2■□□□□ 0.66
CBWD3-207ENST00000611426 TNFRSF11BO00300 401 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 FFAR1O14842 300 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 EDNRAP25101 427 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 FKBP2P26885 142 aaKnown RBP19.19■□□□□ 0.66
CBWD3-207ENST00000611426 ADARB1P78563 741 aaKnown RBP19.19■□□□□ 0.66
CBWD3-207ENST00000611426 BSPH1Q075Z2 132 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 C6orf52Q5T4I8 152 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 USP51Q70EK9 711 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 ATG4DQ86TL0 474 aaPredicted RBP19.19■□□□□ 0.66
CBWD3-207ENST00000611426 HS3ST5Q8IZT8 346 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 ZHX1-C8orf76Q96EF9 292 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 FUZQ9BT04 418 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 POLR2J2Q9GZM3 115 aaKnown RBP19.19■□□□□ 0.66
CBWD3-207ENST00000611426 POLR2J3Q9H1A7 115 aaKnown RBP19.19■□□□□ 0.66
CBWD3-207ENST00000611426 EXOSC3Q9NQT5 275 aaKnown RBP19.19■□□□□ 0.66
CBWD3-207ENST00000611426 U3KQV3 271 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 FN1P02751 2386 aaKnown RBP19.19■□□□□ 0.66
CBWD3-207ENST00000611426 A0A1W2PRQ8 180 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 CLDN24A6NM45 220 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 CAPGP40121 348 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 IDH2P48735 452 aaKnown RBP19.19■□□□□ 0.66
CBWD3-207ENST00000611426 RAD23AP54725 363 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 SPIBQ01892 262 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 DGCR6Q14129 220 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 PPA1Q15181 289 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 VRK2Q86Y07 508 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 DHRSXQ8N5I4 330 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 SMAP2Q8WU79 429 aaPredicted RBP19.19■□□□□ 0.66
CBWD3-207ENST00000611426 NEUROG1Q92886 237 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 MUCL1Q96DR8 90 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 DNAJA3Q96EY1 480 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 PRRC1Q96M27 445 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 A4GNTQ9UNA3 340 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 HDGFL3Q9Y3E1 203 aa19.19■□□□□ 0.66
CBWD3-207ENST00000611426 CSPG4Q6UVK1 2322 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 IGKV3D-15A0A087WSY6 115 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 DPRXA6NFQ7 191 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 PMS2P2O95744 297 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 CCNA2P20248 432 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 IGHV1-2P23083 117 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 CLK1P49759 484 aaKnown RBP19.18■□□□□ 0.66
CBWD3-207ENST00000611426 PDK3Q15120 406 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 NPTX1Q15818 432 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 MICAQ29983 383 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 ZNF672Q499Z4 452 aaPredicted RBP19.18■□□□□ 0.66
CBWD3-207ENST00000611426 ABLIM2Q6H8Q1 611 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 ZNF836Q6ZNA1 936 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 ADGRG3Q86Y34 549 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 OFCC1Q8IZS5 231 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 UBE2J2Q8N2K1 259 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 OR6T1Q8NGN1 323 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 GIPC3Q8TF64 312 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 CNOT9Q92600 299 aaKnown RBP19.18■□□□□ 0.66
CBWD3-207ENST00000611426 TRMT61AQ96FX7 289 aaKnown RBP19.18■□□□□ 0.66
CBWD3-207ENST00000611426 ARL5BQ96KC2 179 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 WFDC6Q9BQY6 131 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 ANKRD19PQ9H560 264 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 ARMC7Q9H6L4 198 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 NMNAT1Q9HAN9 279 aaPredicted RBP19.18■□□□□ 0.66
CBWD3-207ENST00000611426 SMURF2Q9HAU4 748 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 PDP1Q9P0J1 537 aaPredicted RBP19.18■□□□□ 0.66
CBWD3-207ENST00000611426 SLC13A4Q9UKG4 626 aa19.18■□□□□ 0.66
CBWD3-207ENST00000611426 NOSIPQ9Y314 301 aaKnown RBP19.18■□□□□ 0.66
CBWD3-207ENST00000611426 E9PQ18 207 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 J3KTA2 159 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 FMO6PO60774 539 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 GADD45GO95257 159 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 SNAP29O95721 258 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 SOD3P08294 240 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 DANCRP0C864 163 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 ANXA8P13928 327 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 IL7RP16871 459 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 MYF6P23409 242 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 HTR3AP46098 478 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 CDH12P55289 794 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 TIMM23BQ5SRD1 257 aa19.17■□□□□ 0.66
CBWD3-207ENST00000611426 FBXW9Q5XUX1 488 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms