RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 UEVLDQ8IX04 471 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 OFCC1Q8IZS5 231 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 CCDC197Q8NCU1 140 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 OR1K1Q8NGR3 316 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 GEMIN6Q8WXD5 167 aaKnown RBP11.17□□□□□ -0.62
CD9-212ENST00000610354 LZICQ8WZA0 190 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 BCL2L2Q92843 193 aaPredicted RBP11.17□□□□□ -0.62
CD9-212ENST00000610354 FAM162AQ96A26 154 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 MBD6Q96DN6 1003 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 NSL1Q96IY1 281 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 C7orf34Q96L11 122 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 C1QTNF6Q9BXI9 259 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 CXXC4Q9H2H0 198 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 UBTD1Q9HAC8 227 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 GPR35Q9HC97 309 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 DCAF13Q9NV06 445 aaKnown RBP11.17□□□□□ -0.62
CD9-212ENST00000610354 ZNF229Q9UJW7 825 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 TEP1Q99973 2627 aaKnown RBP11.17□□□□□ -0.62
CD9-212ENST00000610354 USF3Q68DE3 2245 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 MED13LQ71F56 2210 aa11.17□□□□□ -0.62
CD9-212ENST00000610354 SLC35F4A4IF30 521 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 B2RBV5 119 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 RPL36A-HNRNPH2H7BZ11 118 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 SLC43A1O75387 559 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 IGF2P01344 180 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 SEMG1P04279 462 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 IFNW1P05000 195 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 TSPAN19P0C672 248 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 CDH2P19022 906 aaPredicted RBP11.16□□□□□ -0.62
CD9-212ENST00000610354 ZNF83P51522 516 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 NR1H2P55055 460 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 ROR2Q01974 943 aaKnown RBP11.16□□□□□ -0.62
CD9-212ENST00000610354 CARD17Q5XLA6 110 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 OR7E24Q6IFN5 339 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 TBPL2Q6SJ96 375 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 RINLQ6ZS11 566 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 MEX3DQ86XN8 651 aaKnown RBP11.16□□□□□ -0.62
CD9-212ENST00000610354 C20orf196Q8IYI0 205 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 DEFB107AQ8IZN7 70 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 C1orf162Q8NEQ5 155 aaPredicted RBP11.16□□□□□ -0.62
CD9-212ENST00000610354 KBTBD8Q8NFY9 601 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 LIPHQ8WWY8 451 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 MUCL1Q96DR8 90 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 SGTBQ96EQ0 304 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 HS6ST2Q96MM7 605 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 FOXC2Q99958 501 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 GORASP2Q9H8Y8 452 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 NANSQ9NR45 359 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 NOX1Q9Y5S8 564 aa11.16□□□□□ -0.62
CD9-212ENST00000610354 A0A087WUU8 490 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 OR6C65A6NJZ3 312 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 SHISA9B4DS77 424 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 ZNF587BE7ETH6 402 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 SERPINI2O75830 405 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 IFNGR1P15260 489 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 MAKP20794 623 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 AHCYP23526 432 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 ARF1P84077 181 aaKnown RBP11.15□□□□□ -0.62
CD9-212ENST00000610354 VLDLRP98155 873 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 RPL18Q07020 188 aaKnown RBP11.15□□□□□ -0.62
CD9-212ENST00000610354 SPOCK1Q08629 439 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 ST3GAL3Q11203 375 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 CAMK2DQ13557 499 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 FHL1Q13642 323 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 KEAP1Q14145 624 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 DEFB113Q30KQ7 82 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 TBRG1Q3YBR2 411 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 SAMD4BQ5PRF9 694 aaKnown RBP11.15□□□□□ -0.62
CD9-212ENST00000610354 ADAM5Q6NVV9 412 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 C16orf89Q6UX73 402 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 FKBP9P1Q75LS8 142 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 SLC35D2Q76EJ3 337 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 KRTAP1-3Q8IUG1 177 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 C17orf78Q8N4C9 275 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 PIK3C3Q8NEB9 887 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 MOSPD2Q8NHP6 518 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 AKAP1Q92667 903 aaKnown RBP eCLIP11.15□□□□□ -0.62
CD9-212ENST00000610354 NDUFAF4Q9P032 175 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 RNF115Q9Y4L5 304 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 ENPP4Q9Y6X5 453 aa11.15□□□□□ -0.62
CD9-212ENST00000610354 A0A096LPE4 126 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 A0A1W2PPZ6 126 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 ZNF503-AS2A6NEH8 195 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 M0R3G1 203 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 HS3ST1O14792 307 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 ARPC2O15144 300 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 CLOCKO15516 846 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 KRT33AO76009 404 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 CD3EP07766 207 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 UMPSP11172 480 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 AQP2P41181 271 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 BIDP55957 195 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 TUBA1BP68363 451 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 TUBA4AP68366 448 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 RUNX1T1Q06455 604 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 MELKQ14680 651 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 LAPTM4AQ15012 233 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 TRAM2Q15035 370 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 CEACAM16Q2WEN9 425 aa11.14□□□□□ -0.63
CD9-212ENST00000610354 SPNS3Q6ZMD2 512 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms