RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 YARS2Q9Y2Z4 477 aaKnown RBP13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 ZC3H12DA2A288 527 aaKnown RBP13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 SLC43A1O75387 559 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 SERPINE2P07093 398 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 PRR35P0CG20 571 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 BDKRB2P30411 391 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 ATP1B3P54709 279 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 TGFBR3Q03167 851 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 TNK1Q13470 666 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 ELAVL1Q15717 326 aaKnown RBP13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 NIPAL3Q6P499 406 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 TRAPPC6BQ86SZ2 158 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF683Q8IZ20 524 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 MAFIPQ8WZ33 124 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 PDCD1LG2Q9BQ51 273 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 METTL17Q9H7H0 456 aaPredicted RBP13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 ACKR4Q9NPB9 350 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 PRELID1Q9Y255 219 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 CROCCQ5TZA2 2017 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 TNFRSF10AO00220 468 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 C1QAP02745 245 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 SBK2P0C263 348 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 ICAM2P13598 275 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 SLC35A1P78382 337 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 C1orf140Q5VVS0 124 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 MOB3CQ70IA8 216 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 SLC43A2Q8N370 569 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 PLCXD1Q9NUJ7 323 aa13.13□□□□□ -0.31
PCDHB16-201ENST00000609684 SMCHD1A6NHR9 2005 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 TRIM64A6NGJ6 449 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 PLRG1O43660 514 aaKnown RBP13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 POU4F3Q15319 338 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 YIF1BQ5BJH7 314 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 AAED1Q7RTV5 226 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 FGF14Q92915 247 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 NICN1Q9BSH3 213 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 EHFQ9NZC4 300 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 NXT1Q9UKK6 140 aaKnown RBP13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 WIF1Q9Y5W5 379 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 PAPPA2Q9BXP8 1791 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 ALOX12BO75342 701 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 EPHA2P29317 976 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 GCH1P30793 250 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 CASP6P55212 293 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 RBMS2Q15434 407 aaKnown RBP13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 SLC35D3Q5M8T2 416 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 EXOSC6Q5RKV6 272 aaKnown RBP13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 PBDC1Q9BVG4 233 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 P2RY10O00398 339 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 KCNK2O95069 426 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 SLC2A10O95528 541 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 KDM8Q8N371 416 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 TCEAL3Q969E4 200 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 PSD2Q9BQI7 771 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 BCL2L10Q9HD36 194 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 UPK1AO00322 258 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF44P15621 663 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 SLC14A1Q13336 389 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 MPEG1Q2M385 716 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 TRIM61Q5EBN2 209 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 MKXQ8IYA7 352 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 TMEM99Q8N816 258 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 OR5D18Q8NGL1 313 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 RSPRY1Q96DX4 576 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 CDCA4Q9BXL8 241 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 TMEM59Q9BXS4 323 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 SLC6A13Q9NSD5 602 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 COQ3Q9NZJ6 369 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 OR51B4Q9Y5P0 310 aa13.12□□□□□ -0.31
PCDHB16-201ENST00000609684 ATG12O94817 140 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 TSPAN15O95858 294 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 DUSP8Q13202 625 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 IDO2Q6ZQW0 420 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 LILRB2Q8N423 598 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 CNEP1R1Q8N9A8 125 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 ARL11Q969Q4 196 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 TEX101Q9BY14 249 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 LIN7BQ9HAP6 207 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 TMEM82A0PJX8 343 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 ASPDHA6ND91 283 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 B4DXG7 233 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 GPX5O75715 221 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 IFNA1P01562 189 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 EFNA3P52797 238 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 CLDN6P56747 220 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 GPLD1P80108 840 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 SIAH3Q8IW03 269 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 DNAAF1Q8NEP3 725 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 OR51D1Q8NGF3 324 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 CNRIP1Q96F85 164 aaPredicted RBP13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF285Q96NJ3 590 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 ADAM23O75077 832 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 FUCA1P04066 466 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 ZNF14P17017 642 aaPredicted RBP13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 CX3CR1P49238 355 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 RAP2BP61225 183 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 FAHD1Q6P587 224 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 IL1F10Q8WWZ1 152 aa13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 PAPOLGQ9BWT3 736 aaKnown RBP13.11□□□□□ -0.31
PCDHB16-201ENST00000609684 GALNT9Q9HCQ5 603 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms