RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 A0A087WUJ7 227 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 GGT3PA6NGU5 568 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 P2RX6O15547 441 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 UPK3AO75631 287 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 PMS2P2O95744 297 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 RPS21P63220 83 aaKnown RBP20.41■□□□□ 0.86
SHANK2-220ENST00000608988 SGCGQ13326 291 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 FGL2Q14314 439 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 LRFN4Q6PJG9 635 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 TMPRSS12Q86WS5 348 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 ZNRF4Q8WWF5 429 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 WDR89Q96FK6 387 aaPredicted RBP20.41■□□□□ 0.86
SHANK2-220ENST00000608988 SIPA1Q96FS4 1042 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 GPR160Q9UJ42 338 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 ADAM18Q9Y3Q7 739 aa20.41■□□□□ 0.86
SHANK2-220ENST00000608988 TRPM6Q9BX84 2022 aa20.4■□□□□ 0.86
SHANK2-220ENST00000608988 TTLL8A6PVC2 850 aa20.4■□□□□ 0.86
SHANK2-220ENST00000608988 SULT1C2O00338 296 aa20.4■□□□□ 0.86
SHANK2-220ENST00000608988 PAK4O96013 591 aaPredicted RBP20.4■□□□□ 0.86
SHANK2-220ENST00000608988 ID2Q02363 134 aa20.4■□□□□ 0.86
SHANK2-220ENST00000608988 EXOSC7Q15024 291 aaKnown RBP20.4■□□□□ 0.86
SHANK2-220ENST00000608988 PDGFRLQ15198 375 aa20.4■□□□□ 0.86
SHANK2-220ENST00000608988 ZNHIT3Q15649 155 aaPredicted RBP20.4■□□□□ 0.86
SHANK2-220ENST00000608988 MANEAQ5SRI9 462 aa20.4■□□□□ 0.86
SHANK2-220ENST00000608988 STPG1Q5TH74 334 aa20.4■□□□□ 0.86
SHANK2-220ENST00000608988 KIRREL2Q6UWL6 708 aa20.4■□□□□ 0.86
SHANK2-220ENST00000608988 ZAR1Q86SH2 424 aa20.4■□□□□ 0.86
SHANK2-220ENST00000608988 SMARCD2Q92925 531 aa20.4■□□□□ 0.86
SHANK2-220ENST00000608988 SRMSQ9H3Y6 488 aa20.4■□□□□ 0.86
SHANK2-220ENST00000608988 RASL12Q9NYN1 266 aa20.4■□□□□ 0.86
SHANK2-220ENST00000608988 TMEM212A6NML5 194 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 DNASE2O00115 360 aaPredicted RBP20.39■□□□□ 0.86
SHANK2-220ENST00000608988 SIX6O95475 246 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 ABHD16AO95870 558 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 PROS1P07225 676 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 PRKACAP17612 351 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 SRSF4Q08170 494 aaKnown RBP20.39■□□□□ 0.86
SHANK2-220ENST00000608988 C2orf68Q2NKX9 166 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 LPCAT3Q6P1A2 487 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 DGLUCYQ7Z3D6 616 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 CCDC36Q8IYA8 594 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 FLVCR1-AS1Q8TAF5 88 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 PHYHIPLQ96FC7 376 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 COMMD4Q9H0A8 199 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 TSPAN10Q9H1Z9 355 aaPredicted RBP20.39■□□□□ 0.86
SHANK2-220ENST00000608988 CDV3Q9UKY7 258 aaKnown RBP20.39■□□□□ 0.86
SHANK2-220ENST00000608988 PRELID3BQ9Y3B1 194 aa20.39■□□□□ 0.86
SHANK2-220ENST00000608988 SNRNP200O75643 2136 aaKnown RBP20.39■□□□□ 0.85
SHANK2-220ENST00000608988 CENPFP49454 3210 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 TCRBV16S1A1N1A0A5B0 115 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 IDSB3KWA1 339 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 CYR61O00622 381 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 SRPX2O60687 465 aaPredicted RBP20.39■□□□□ 0.85
SHANK2-220ENST00000608988 DNAJB6O75190 326 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 ACTBP60709 375 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 ACTG1P63261 375 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 CTAG1AP78358 180 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 HTRA4P83105 476 aaPredicted RBP20.39■□□□□ 0.85
SHANK2-220ENST00000608988 ZNF345Q14585 488 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 CLVS2Q5SYC1 327 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 JAZF1Q86VZ6 243 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 SFTPA1Q8IWL2 248 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 ZNF614Q8N883 585 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 EXD3Q8N9H8 876 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 OR2M4Q96R27 311 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 TMEM138Q9NPI0 162 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 MRM2Q9UI43 246 aaKnown RBP20.39■□□□□ 0.85
SHANK2-220ENST00000608988 PILRAQ9UKJ1 303 aa20.39■□□□□ 0.85
SHANK2-220ENST00000608988 KLF2Q9Y5W3 355 aaPredicted RBP20.39■□□□□ 0.85
SHANK2-220ENST00000608988 CHURC1-FNTBB4DL54 471 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 CTAG2O75638 210 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 CD8AP01732 235 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 ITGB2P05107 769 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 PTHLHP12272 177 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 VIPR2P41587 438 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 SNRPNP63162 240 aaKnown RBP20.38■□□□□ 0.85
SHANK2-220ENST00000608988 RASGEF1BQ0VAM2 473 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 DCAF12L2Q5VW00 463 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 C11orf88Q6PI97 169 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 UQCC3Q6UW78 93 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 ZNF440Q8IYI8 595 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 GPR148Q8TDV2 347 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 ST8SIA2Q92186 375 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 ADAD1Q96M93 576 aaKnown RBP20.38■□□□□ 0.85
SHANK2-220ENST00000608988 SLC25A21Q9BQT8 299 aaPredicted RBP20.38■□□□□ 0.85
SHANK2-220ENST00000608988 APOOQ9BUR5 198 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 FRRS1LQ9P0K9 344 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 PLCL2Q9UPR0 1127 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 PRRC2BQ5JSZ5 2229 aaKnown RBP20.38■□□□□ 0.85
SHANK2-220ENST00000608988 NUP210LQ5VU65 1888 aa20.38■□□□□ 0.85
SHANK2-220ENST00000608988 PRR32B1ATL7 298 aa20.37■□□□□ 0.85
SHANK2-220ENST00000608988 PHYHO14832 338 aa20.37■□□□□ 0.85
SHANK2-220ENST00000608988 CDC40O60508 579 aaKnown RBP eCLIP20.37■□□□□ 0.853e-6■■■□□ 16.3
SHANK2-220ENST00000608988 ADAM11O75078 769 aa20.37■□□□□ 0.85
SHANK2-220ENST00000608988 CBX7O95931 251 aa20.37■□□□□ 0.85
SHANK2-220ENST00000608988 SLC35E2P0CK97 266 aa20.37■□□□□ 0.85
SHANK2-220ENST00000608988 GTF2F2P13984 249 aa20.37■□□□□ 0.85
SHANK2-220ENST00000608988 PRSS3P35030 304 aa20.37■□□□□ 0.85
SHANK2-220ENST00000608988 EGR3Q06889 387 aa20.37■□□□□ 0.85
SHANK2-220ENST00000608988 DEFB115Q30KQ5 88 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms