RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 PDXPQ96GD0 296 aa2.18□□□□□ -2.06
HDDC2-207ENST00000608532 SPATA7Q9P0W8 599 aa2.18□□□□□ -2.06
HDDC2-207ENST00000608532 F11RQ9Y624 299 aaKnown RBP2.18□□□□□ -2.06
HDDC2-207ENST00000608532 CABIN1Q9Y6J0 2220 aa2.18□□□□□ -2.06
HDDC2-207ENST00000608532 ATP8B3O60423 1300 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 MN1Q10571 1320 aaPredicted RBP2.17□□□□□ -2.06
HDDC2-207ENST00000608532 IGHV5-51A0A0C4DH38 117 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 SRP72O76094 671 aaKnown RBP2.17□□□□□ -2.06
HDDC2-207ENST00000608532 IGHV3-43DP0DP04 118 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 EPB41P11171 864 aaKnown RBP2.17□□□□□ -2.06
HDDC2-207ENST00000608532 PRPS2P11908 318 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 OMGP23515 440 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 IL12AP29459 219 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 CA8P35219 290 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 C1orf61Q13536 156 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 DUSP7Q16829 419 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 TPD52L1Q16890 204 aaPredicted RBP2.17□□□□□ -2.06
HDDC2-207ENST00000608532 TTLL9Q3SXZ7 439 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 DMRTC1Q5HYR2 192 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 CNIH2Q6PI25 160 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 ZNF679Q8IYX0 411 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 SPNS1Q9H2V7 528 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 GIN1Q9NXP7 522 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 XCL2Q9UBD3 114 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 CD84Q9UIB8 345 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 RPH3ALQ9UNE2 315 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 MEMO1Q9Y316 297 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 FANCIQ9NVI1 1328 aa2.17□□□□□ -2.06
HDDC2-207ENST00000608532 IGHV3-66A0A0C4DH42 116 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 POLR2DO15514 142 aaKnown RBP2.16□□□□□ -2.06
HDDC2-207ENST00000608532 DIRAS1O95057 198 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 RAP1AP62834 184 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 SELPLGQ14242 412 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 MESDQ14696 234 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 VAX1Q5SQQ9 334 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 LINC00173Q6ZV60 143 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 NCCRP1Q6ZVX7 275 aaPredicted RBP2.16□□□□□ -2.06
HDDC2-207ENST00000608532 TRIM69Q86WT6 500 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 PLA2G4DQ86XP0 818 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 ZADH2Q8N4Q0 377 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 SYT14Q8NB59 555 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 VN1R2Q8NFZ6 395 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 OR52H1Q8NGJ2 320 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 GEMIN6Q8WXD5 167 aaKnown RBP2.16□□□□□ -2.06
HDDC2-207ENST00000608532 FGF14Q92915 247 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 LRRC58Q96CX6 371 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 RBMXL1Q96E39 390 aaKnown RBP2.16□□□□□ -2.06
HDDC2-207ENST00000608532 OXGR1Q96P68 337 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 CLCC1Q96S66 551 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 FOXC2Q99958 501 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 GABARAPL3Q9BY60 117 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 NHEJ1Q9H9Q4 299 aaPredicted RBP2.16□□□□□ -2.06
HDDC2-207ENST00000608532 ZNF355PQ9NSJ1 428 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 CHRNA9Q9UGM1 479 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 TRIOBPQ9H2D6 2365 aa2.16□□□□□ -2.06
HDDC2-207ENST00000608532 RPL36A-HNRNPH2H7BZ11 118 aa2.15□□□□□ -2.07
HDDC2-207ENST00000608532 MED7O43513 233 aa2.15□□□□□ -2.07
HDDC2-207ENST00000608532 ATP6V1C1P21283 382 aa2.15□□□□□ -2.07
HDDC2-207ENST00000608532 GNA11P29992 359 aa2.15□□□□□ -2.07
HDDC2-207ENST00000608532 NCBP2P52298 156 aaKnown RBP eCLIP2.15□□□□□ -2.07
HDDC2-207ENST00000608532 SLC7A9P82251 487 aa2.15□□□□□ -2.07
HDDC2-207ENST00000608532 SF3A2Q15428 464 aaKnown RBP2.15□□□□□ -2.07
HDDC2-207ENST00000608532 DNLZQ5SXM8 178 aa2.15□□□□□ -2.07
HDDC2-207ENST00000608532 H2AFVQ71UI9 128 aa2.15□□□□□ -2.07
HDDC2-207ENST00000608532 RIMKLAQ8IXN7 391 aa2.15□□□□□ -2.07
HDDC2-207ENST00000608532 OSBPL11Q9BXB4 747 aa2.15□□□□□ -2.07
HDDC2-207ENST00000608532 COQ10BQ9H8M1 238 aa2.15□□□□□ -2.07
HDDC2-207ENST00000608532 LAMP5Q9UJQ1 280 aa2.15□□□□□ -2.07
HDDC2-207ENST00000608532 TIMM10BQ9Y5J6 103 aa2.15□□□□□ -2.07
HDDC2-207ENST00000608532 FRMPD3Q5JV73 1810 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 GPRASP1Q5JY77 1395 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 A0A1B0GVX0 72 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 ZNF233A6NK53 670 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 RBFOX2O43251 390 aaKnown RBP eCLIP2.14□□□□□ -2.079e-6■■□□□ 11.7
HDDC2-207ENST00000608532 MPZL1O95297 269 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 SLC2A5P22732 501 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 PAX7P23759 505 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 SOX6P35712 828 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 RPL13AP40429 203 aaKnown RBP2.14□□□□□ -2.07
HDDC2-207ENST00000608532 QARSP47897 775 aaKnown RBP2.14□□□□□ -2.07
HDDC2-207ENST00000608532 CYB561P49447 251 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 ERVK-25P63136 954 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 AQP6Q13520 282 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 HES5Q5TA89 166 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 KRTAP13-1Q8IUC0 172 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 TMEM123Q8N131 208 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 C15orf56Q8N910 161 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 SDR42E1Q8WUS8 393 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 TGM7Q96PF1 710 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 MRPL47Q9HD33 250 aaKnown RBP2.14□□□□□ -2.07
HDDC2-207ENST00000608532 RAB18Q9NP72 206 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 FARSBQ9NSD9 589 aaKnown RBP2.14□□□□□ -2.07
HDDC2-207ENST00000608532 AURKCQ9UQB9 309 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 KIF3AQ9Y496 699 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 RFNGQ9Y644 331 aa2.14□□□□□ -2.07
HDDC2-207ENST00000608532 KIR2DS1A0A191URI9 304 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 CCDC182A6NF36 153 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 KMOO15229 486 aa2.13□□□□□ -2.07
HDDC2-207ENST00000608532 RRP8O43159 456 aaKnown RBP2.13□□□□□ -2.07
HDDC2-207ENST00000608532 HSMCR30P0CW71 290 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms