RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 DUX5Q96PT3 197 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 OR14A2Q96R54 314 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 FIZ1Q96SL8 496 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 CD180Q99467 661 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 NUDT22Q9BRQ3 303 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 MCRIP2Q9BUT9 160 aaKnown RBP4.33□□□□□ -1.72
LINC01109-201ENST00000603837 ANGPTL4Q9BY76 406 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 ZMAT4Q9H898 229 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 AKIRIN1Q9H9L7 192 aaPredicted RBP4.33□□□□□ -1.72
LINC01109-201ENST00000603837 AMBNQ9NP70 447 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 MYOZ2Q9NPC6 264 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 LANCL2Q9NS86 450 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 TMEM248Q9NWD8 314 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 MTMR10Q9NXD2 777 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 VNN3Q9NY84 501 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 HAO2Q9NYQ3 351 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 APOBEC3BQ9UH17 382 aaKnown RBP4.33□□□□□ -1.72
LINC01109-201ENST00000603837 CD84Q9UIB8 345 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 PRG3Q9Y2Y8 225 aaPredicted RBP4.33□□□□□ -1.72
LINC01109-201ENST00000603837 COL1A2P08123 1366 aa4.33□□□□□ -1.72
LINC01109-201ENST00000603837 IGKV6D-41A0A0C4DH26 115 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 FAM230AA0A1W2PPH8 454 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 LNP1A1A4G5 178 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TBC1D3FA6NER0 549 aaPredicted RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 DRGXA6NNA5 263 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CDRT15L2A8MXV6 281 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 H7C4K7 107 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 APOC4-APOC2K7ER74 178 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 M0R143 59 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 AZIN1O14977 448 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 MSH4O15457 936 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 FZD7O75084 574 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ITGA10O75578 1167 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 AQP8O94778 261 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ICAM1P05362 532 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ANXA2P07355 339 aaKnown RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 BMP7P18075 431 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CERS1P27544 350 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 HTR2AP28223 471 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 MAGEA6P43360 314 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 MAGEA12P43365 314 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 MMP15P51511 669 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TDGF1P3P51864 188 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 GFRA1P56159 465 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 STXBP1P61764 594 aaKnown RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 PTGR1Q14914 329 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 SSX1Q16384 188 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ZSWIM7Q19AV6 140 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 FBXW9Q5XUX1 488 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 STEAP4Q687X5 459 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ASPHD2Q6ICH7 369 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 PRSS55Q6UWB4 352 aaPredicted RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ENPP6Q6UWR7 440 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 GDPD4Q6W3E5 623 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 GDPGP1Q6ZNW5 385 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 LANCL3Q6ZV70 420 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ASB18Q6ZVZ8 466 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CLEC14AQ86T13 490 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ISCA2Q86U28 154 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CBWD2Q8IUF1 395 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 KLHDC8BQ8IXV7 354 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 SLC44A3Q8N4M1 653 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CLDN22Q8N7P3 220 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 FAM98AQ8NCA5 519 aaKnown RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TMEM104Q8NE00 496 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 OR6K3Q8NGY3 331 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 FAM110DQ8TAY7 271 aaPredicted RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CCDC107Q8WV48 283 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 APH1BQ8WW43 257 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ASB5Q8WWX0 329 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 PLPPR2Q96GM1 343 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 MTERF1Q99551 399 aaKnown RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CBWD1Q9BRT8 395 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 SNHG12Q9BXW3 62 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ABCG5Q9H222 651 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TMEM138Q9NPI0 162 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 RNF146Q9NTX7 359 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 COMMD3Q9UBI1 195 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 RNF150Q9ULK6 438 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 C14orf166Q9Y224 244 aaKnown RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 BTRCQ9Y297 605 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 SLC35A3Q9Y2D2 325 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 BLOC1S5-TXNDC5H3BN57 136 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CXCR6O00574 342 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TSPAN2O60636 221 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 JCHAINP01591 159 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 APOC2P02655 101 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 RAB40ALP0C0E4 278 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 UBCP0CG48 685 aaKnown RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 C1GALT1C1LP0DN25 315 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 UGT2B7P16662 529 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ACHEP22303 614 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CEACAM8P31997 349 aaPredicted RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CFHR2P36980 270 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 MATKP42679 507 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 VAMP7P51809 220 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 JAK3P52333 1124 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 HCCSP53701 268 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ATP5IP56385 69 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms