RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 BCL10O95999 233 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 ADRB1P08588 477 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 PCMT1P22061 227 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 HSF1Q00613 529 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 POU3F1Q03052 451 aaPredicted RBP16.13■□□□□ 0.17
VRK3-225ENST00000601912 ZNF239Q16600 458 aaKnown RBP16.13■□□□□ 0.17
VRK3-225ENST00000601912 MESTQ5EB52 335 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 PDSS1Q5T2R2 415 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 XAF1Q6GPH4 301 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 IGFL3Q6UXB1 125 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 GPR141Q7Z602 305 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 UEVLDQ8IX04 471 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 OR52I1Q8NGK6 324 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 OR9Q1Q8NGQ5 310 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 FCGR1BQ92637 280 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 RORBQ92753 470 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 DDOQ99489 341 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 TEAD3Q99594 435 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 TUBA1CQ9BQE3 449 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 ACKR4Q9NPB9 350 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 ACOT13Q9NPJ3 140 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 DIMT1Q9UNQ2 313 aaKnown RBP16.13■□□□□ 0.17
VRK3-225ENST00000601912 ACACAQ13085 2346 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 NCKAP5O14513 1909 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 MED12Q93074 2177 aa16.13■□□□□ 0.17
VRK3-225ENST00000601912 SPTBN4Q9H254 2564 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 A6NIZ1 184 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 EIF1AYO14602 144 aaKnown RBP16.12■□□□□ 0.17
VRK3-225ENST00000601912 ARHGEF9O43307 516 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 CELA3AP09093 270 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 MYL12AP19105 171 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 SLC2A5P22732 501 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 TTKP33981 857 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 MAP2K4P45985 399 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 SLC25A1P53007 311 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 CARD18P57730 90 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 RAC3P60763 192 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 RAP1BP61224 184 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 RAP1AP62834 184 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 PON3Q15166 354 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 TBCEQ15813 527 aaPredicted RBP16.12■□□□□ 0.17
VRK3-225ENST00000601912 SLC35D3Q5M8T2 416 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 LCN1P1Q5VSP4 162 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 FAM205BPQ63HN1 556 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 HBMQ6B0K9 141 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 BORAQ6PGQ7 559 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 SLC35D2Q76EJ3 337 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 GHDCQ8N2G8 530 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 ZNF519Q8TB69 540 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 CRELD1Q96HD1 420 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 OXGR1Q96P68 337 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 SNX18Q96RF0 628 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 FGF20Q9NP95 211 aaPredicted RBP16.12■□□□□ 0.17
VRK3-225ENST00000601912 TIGARQ9NQ88 270 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 CHCHD3Q9NX63 227 aaKnown RBP16.12■□□□□ 0.17
VRK3-225ENST00000601912 RASD1Q9Y272 281 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 ERGIC3Q9Y282 383 aa16.12■□□□□ 0.17
VRK3-225ENST00000601912 LOC102725191A0A1B0GVB3 256 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 SMIM31A0A1B0GVY4 71 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 K7ENP7 123 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 VAMP5O95183 116 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 GYPBP06028 91 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 CLUP10909 449 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 HLA-DOBP13765 273 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 IFNGR1P15260 489 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 STARP49675 285 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 P2RY4P51582 365 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 UCNP55089 124 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 CLDN20P56880 219 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 H3F3AP84243 136 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 C1DQ13901 141 aaKnown RBP16.11■□□□□ 0.17
VRK3-225ENST00000601912 RNLSQ5VYX0 342 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 INO80CQ6PI98 192 aaPredicted RBP16.11■□□□□ 0.17
VRK3-225ENST00000601912 GPAT4Q86UL3 456 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 GGNQ86UU5 652 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 UBQLNLQ8IYU4 475 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 OR2V1Q8NHB1 315 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 FAR1Q8WVX9 515 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 NMNAT2Q9BZQ4 307 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 FAM192AQ9GZU8 254 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 RPRD1BQ9NQG5 326 aaKnown RBP16.11■□□□□ 0.17
VRK3-225ENST00000601912 HAO2Q9NYQ3 351 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 TNFRSF10DQ9UBN6 386 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 EXOGQ9Y2C4 368 aaKnown RBP16.11■□□□□ 0.17
VRK3-225ENST00000601912 ASPMQ8IZT6 3477 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 CCDC182A6NF36 153 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 ZNF99A8MXY4 864 aaPredicted RBP16.11■□□□□ 0.17
VRK3-225ENST00000601912 MKRN2OSH3BPM6 223 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 ZNF43P17038 809 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 SPI1P17947 270 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 AGFG1P52594 562 aaKnown RBP16.11■□□□□ 0.17
VRK3-225ENST00000601912 POU4F2Q12837 409 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 IRF3Q14653 427 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 HDDC2Q7Z4H3 204 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 OR51G2Q8NGK0 314 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 OR2T4Q8NH00 348 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 MUL1Q969V5 352 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 TMIGD2Q96BF3 282 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 SLC6A15Q9H2J7 730 aa16.11■□□□□ 0.17
VRK3-225ENST00000601912 LDAHQ9H6V9 325 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms