RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 BEX5Q5H9J7 111 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 TIMM23BQ5SRD1 257 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 PODNL1Q6PEZ8 512 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 ZNF730Q6ZMV8 503 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 CDH24Q86UP0 819 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 WDR31Q8NA23 367 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 ANKK1Q8NFD2 765 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 MOSPD2Q8NHP6 518 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 LIPHQ8WWY8 451 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 ACOT11Q8WXI4 607 aaPredicted RBP13.36□□□□□ -0.27
LIG1-219ENST00000600055 SLC7A6OSQ96CW6 309 aaPredicted RBP13.36□□□□□ -0.27
LIG1-219ENST00000600055 BPIFA2Q96DR5 249 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 ZNF837Q96EG3 531 aaPredicted RBP13.36□□□□□ -0.27
LIG1-219ENST00000600055 MUS81Q96NY9 551 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 NPAP1Q9NZP6 1156 aa13.36□□□□□ -0.27
LIG1-219ENST00000600055 PRPF19Q9UMS4 504 aaKnown RBP13.36□□□□□ -0.27
LIG1-219ENST00000600055 TCRBV5S2A0A599 114 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 OR6C65A6NJZ3 312 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 M0R3G1 203 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 AKAP8O43823 692 aaKnown RBP13.35□□□□□ -0.27
LIG1-219ENST00000600055 F13BP05160 661 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 PRKCDQ05655 676 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 TRIM25Q14258 630 aaKnown RBP13.35□□□□□ -0.27
LIG1-219ENST00000600055 LAPTM4AQ15012 233 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 HIKESHIQ53FT3 197 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 OR7E24Q6IFN5 339 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 MBOAT2Q6ZWT7 520 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 SLC35D2Q76EJ3 337 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 ABHD12BQ7Z5M8 362 aaPredicted RBP13.35□□□□□ -0.27
LIG1-219ENST00000600055 C20orf196Q8IYI0 205 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 GPR137CQ8N3F9 429 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 OR52J3Q8NH60 311 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 SLC7A13Q8TCU3 470 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 CCDC124Q96CT7 223 aaKnown RBP13.35□□□□□ -0.27
LIG1-219ENST00000600055 MUCL1Q96DR8 90 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 PIP5K1AQ99755 562 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 USB1Q9BQ65 265 aaKnown RBP13.35□□□□□ -0.27
LIG1-219ENST00000600055 C1QTNF6Q9BXI9 259 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 GPR35Q9HC97 309 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 SLC17A5Q9NRA2 495 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 SLC25A15Q9Y619 301 aa13.35□□□□□ -0.27
LIG1-219ENST00000600055 ABCA12Q86UK0 2595 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 PDZD2O15018 2839 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 TRBV4-1A0A0J9YWV2 114 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 A0A1W2PRQ8 180 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 DPRXA6NFQ7 191 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 ZNF726A6NNF4 738 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 GYG2O15488 501 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 FABP3P05413 133 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 TSPAN19P0C672 248 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 GPR4P46093 362 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 TGFBR3Q03167 851 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 GABPB1Q06547 395 aaPredicted RBP13.34□□□□□ -0.27
LIG1-219ENST00000600055 DGCR6Q14129 220 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 SEC23BQ15437 767 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 CEACAM16Q2WEN9 425 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 FGD3Q5JSP0 725 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 NCMAPQ5T1S8 102 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 LCN8Q6JVE9 175 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 HMBOX1Q6NT76 420 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 P2RY8Q86VZ1 359 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 DHFR2Q86XF0 187 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 RNF113BQ8IZP6 322 aaKnown RBP13.34□□□□□ -0.27
LIG1-219ENST00000600055 C1orf162Q8NEQ5 155 aaPredicted RBP13.34□□□□□ -0.27
LIG1-219ENST00000600055 OR1K1Q8NGR3 316 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 MCUR1Q96AQ8 359 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 DHRS1Q96LJ7 313 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 SEPHS2Q99611 448 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 ANKRD19PQ9H560 264 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 CRLF2Q9HC73 371 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 PLEKHA6Q9Y2H5 1048 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 NOTCH2Q04721 2471 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 CSMD2Q7Z408 3487 aa13.34□□□□□ -0.27
LIG1-219ENST00000600055 TRAV27A0A087WT01 109 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 A0A096LPE4 126 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 A0A1W2PPZ6 126 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 EFCAB9A8MZ26 197 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 RPL36A-HNRNPH2H7BZ11 118 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 EBAG9O00559 213 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 CDC42EP2O14613 210 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 CLOCKO15516 846 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 ATP5HO75947 161 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 SAGP10523 405 aaPredicted RBP13.33□□□□□ -0.28
LIG1-219ENST00000600055 ITGA2P17301 1181 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 RASSF2P50749 326 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 ZNF83P51522 516 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 ARF1P84077 181 aaKnown RBP13.33□□□□□ -0.28
LIG1-219ENST00000600055 SPIBQ01892 262 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 RUNX1T1Q06455 604 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 BNIP1Q12981 228 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 FHL1Q13642 323 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 TBRG1Q3YBR2 411 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 IGFN1Q86VF2 1251 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 ZDHHC21Q8IVQ6 265 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 OR13C2Q8NGS9 318 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 OR6N1Q8NGY5 312 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 OR51A7Q8NH64 312 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 OR6X1Q8NH79 312 aa13.33□□□□□ -0.28
LIG1-219ENST00000600055 BCL2L2Q92843 193 aaPredicted RBP13.33□□□□□ -0.28
LIG1-219ENST00000600055 TNFRSF13CQ96RJ3 184 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms