RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 LRRC75AQ8NAA5 344 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 POMGNT2Q8NAT1 580 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 MOSPD2Q8NHP6 518 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 BPIFA2Q96DR5 249 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 ZC3HAV1LQ96H79 300 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 ALKBH3Q96Q83 286 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 HS3ST6Q96QI5 342 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 PIP5K1AQ99755 562 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 EMC6Q9BV81 110 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 HIF3AQ9Y2N7 669 aa17.14■□□□□ 0.33
SHKBP1-221ENST00000599833 HTR3EA5X5Y0 456 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 C11orf98E9PRG8 122 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 RPL36A-HNRNPH2H7BZ11 118 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 GYG2O15488 501 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 GSC2O15499 205 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 IFI30P13284 250 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 IL32P24001 234 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 MPGP29372 298 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 DNAJA1P31689 397 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 AQP2P41181 271 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 OMPP47874 163 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 DNAL1Q4LDG9 190 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 TMPRSS11FQ6ZWK6 438 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 DHFR2Q86XF0 187 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 C20orf196Q8IYI0 205 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 UBE2J2Q8N2K1 259 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 WDR31Q8NA23 367 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 CCDC124Q96CT7 223 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 GPA33Q99795 319 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 PLEKHF2Q9H8W4 249 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 NPAP1Q9NZP6 1156 aa17.13■□□□□ 0.33
SHKBP1-221ENST00000599833 SLC35F4A4IF30 521 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 OR5H1A6NKK0 313 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 RAD51DO75771 328 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 FABP3P05413 133 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 IFNGR1P15260 489 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 TRAP1Q12931 704 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 C1DQ13901 141 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 LAPTM4AQ15012 233 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 TIMM23BQ5SRD1 257 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 C9orf135Q5VTT2 229 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 NANOGNBQ7Z5D8 188 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 CYP4Z1Q86W10 505 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 CDC20BQ86Y33 519 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 ZDHHC21Q8IVQ6 265 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 ANKK1Q8NFD2 765 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 NRGNQ92686 78 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 SEPHS2Q99611 448 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 MAGIXQ9H6Y5 334 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 ZNF226Q9NYT6 803 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 SLC25A15Q9Y619 301 aa17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 MAP1AP78559 2803 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-221ENST00000599833 CCDC168Q8NDH2 2452 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 MYO9AB2RTY4 2548 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 SH3PXD2BA1X283 911 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 OR6C65A6NJZ3 312 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 DNAJC8O75937 253 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 F13BP05160 661 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 UMPSP11172 480 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 AHCYP23526 432 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 IFNA8P32881 189 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 HMGA2P52926 109 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 FXYD6P3P58550 94 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 RUNX1T1Q06455 604 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 ZNF730Q6ZMV8 503 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 SLC35D2Q76EJ3 337 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 ADGRG5Q8IZF4 528 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 C1orf162Q8NEQ5 155 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 OR13C2Q8NGS9 318 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 OR6X1Q8NH79 312 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 HSD17B8Q92506 261 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 LRR1Q96L50 414 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 TMEM204Q9BSN7 226 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 CLEC4MQ9H2X3 399 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 GPR35Q9HC97 309 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 VNN3Q9NY84 501 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 UPB1Q9UBR1 384 aa17.11■□□□□ 0.33
SHKBP1-221ENST00000599833 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 NPIPB13A6NJU9 1138 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 NPIPB4C9JG80 1138 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 BLOC1S5-TXNDC5H3BN57 136 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 PTP4A3O75365 173 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 SLC43A1O75387 559 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 ITGA2P17301 1181 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 RRM2P31350 389 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 GPR4P46093 362 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 BIDP55957 195 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 ROR2Q01974 943 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 CAMK2DQ13557 499 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 MELKQ14680 651 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 HIST3H3Q16695 136 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 ARMC4Q5T2S8 1044 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 TMEM200AQ86VY9 491 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 OR4C15Q8NGM1 316 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 OR1K1Q8NGR3 316 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 ASB10Q8WXI3 467 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 BCL2L2Q92843 193 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 TMEM54Q969K7 222 aa17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 USB1Q9BQ65 265 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-221ENST00000599833 MRPL13Q9BYD1 178 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms