RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	RAD21L1	Q9H4I0	556 aa		9.1	□□□□□ -0.95
LSM4-205	ENST00000597776	IKZF5	Q9H5V7	419 aa		9.1	□□□□□ -0.95
LSM4-205	ENST00000597776	C12orf10	Q9HB07	376 aa		9.1	□□□□□ -0.95
LSM4-205	ENST00000597776	MOV10	Q9HCE1	1003 aa	Known RBP	9.1	□□□□□ -0.95
LSM4-205	ENST00000597776	DYNLRB1	Q9NP97	96 aa		9.1	□□□□□ -0.95
LSM4-205	ENST00000597776	MED29	Q9NX70	200 aa		9.1	□□□□□ -0.95
LSM4-205	ENST00000597776	USH1C	Q9Y6N9	552 aa		9.1	□□□□□ -0.95
LSM4-205	ENST00000597776		A0A087WUJ7	227 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	LOC102725191	A0A1B0GVB3	256 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	LRRN3	E7EW58	273 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	MS4A18	H0YCH9	400 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	AKAP8	O43823	692 aa	Known RBP	9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	OR2T1	O43869	369 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	LILRA1	O75019	489 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	ERCC1	P07992	297 aa	Predicted RBP	9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	TACSTD2	P09758	323 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	CD79A	P11912	226 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	GIF	P27352	417 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	APEX1	P27695	318 aa	Known RBP	9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	AQP1	P29972	269 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	CHN2	P52757	468 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	SLC18A1	P54219	525 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	AQP5	P55064	265 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	STX1B	P61266	288 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	NCALD	P61601	193 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	CDK6	Q00534	326 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	POU3F1	Q03052	451 aa	Predicted RBP	9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	PIGF	Q07326	219 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	CCNI	Q14094	377 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	DAG1	Q14118	895 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	TRIP10	Q15642	601 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	MS4A18	Q3C1V0	323 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	PAGE3	Q5JUK9	113 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	LRIF1	Q5T3J3	769 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	REEP3	Q6NUK4	255 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	DHRS4L2	Q6PKH6	230 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	EPGN	Q6UW88	154 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	C5orf46	Q6UWT4	87 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	KRT73	Q86Y46	540 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	UEVLD	Q8IX04	471 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	C20orf196	Q8IYI0	205 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	ADPRHL1	Q8NDY3	354 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	DNAJA4	Q8WW22	397 aa	Predicted RBP	9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	NEU4	Q8WWR8	484 aa	Predicted RBP	9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	TLCD1	Q96CP7	247 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	TXNDC15	Q96J42	360 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	ANKRD27	Q96NW4	1050 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	MOGAT1	Q96PD6	335 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	B3GNT2	Q9NY97	397 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	VAPA	Q9P0L0	249 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	USP22	Q9UPT9	525 aa		9.09	□□□□□ -0.95
LSM4-205	ENST00000597776	NBEAL1	Q6ZS30	2694 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	VSTM5	A8MXK1	200 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	TPST2	O60704	377 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	SERPINI2	O75830	405 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	BGLAP	P02818	100 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	IFNGR1	P15260	489 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	B4GALT1	P15291	398 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	IDH3A	P50213	366 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	RGS8	P57771	180 aa	Predicted RBP	9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	CAMK2D	Q13557	499 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	RIN1	Q13671	783 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	SCARB2	Q14108	478 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	MFSD13A	Q14CX5	517 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	OR1Q1	Q15612	314 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	GSG1	Q2KHT4	349 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	FAM91A1	Q658Y4	838 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	ULK3	Q6PHR2	472 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	BLOC1S3	Q6QNY0	202 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	NHLRC1	Q6VVB1	395 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF813	Q6ZN06	617 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	NET1	Q7Z628	596 aa	Predicted RBP	9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF786	Q8N393	782 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	C10orf53	Q8N6V4	93 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	UBASH3B	Q8TF42	649 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	SPDL1	Q96EA4	605 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	SLC47A1	Q96FL8	570 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	SLC41A3	Q96GZ6	507 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	C1orf159	Q96HA4	380 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	SYT3	Q9BQG1	590 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	EBF4	Q9BQW3	602 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	ASPN	Q9BXN1	380 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	MRPL37	Q9BZE1	423 aa	Known RBP	9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	ULBP2	Q9BZM5	246 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	TMBIM4	Q9HC24	238 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	SLC52A3	Q9NQ40	469 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	TCF7L2	Q9NQB0	619 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	SELENON	Q9NZV5	590 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	CCDC167	Q9P0B6	97 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	TES	Q9UGI8	421 aa	Known RBP	9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	FBXO9	Q9UK97	447 aa	Predicted RBP	9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	FZR1	Q9UM11	496 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	CMAHP	Q9Y471	501 aa		9.08	□□□□□ -0.96
LSM4-205	ENST00000597776	TRBV5-3	A0A0A0MS03	114 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776		A0A0B4J2E0	115 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776		A0A1B0GX12	115 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776		M0R3H8	397 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	HAX1	O00165	279 aa		9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	POLR3G	O15318	223 aa	Predicted RBP	9.07	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF14	P17017	642 aa	Predicted RBP	9.07	□□□□□ -0.96

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