RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 ZNF770Q6IQ21 691 aaPredicted RBP12.71□□□□□ -0.37
VRK3-213ENST00000597215 ZNF474Q6S9Z5 364 aaPredicted RBP12.71□□□□□ -0.37
VRK3-213ENST00000597215 NHLRC1Q6VVB1 395 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 Q6ZT83 130 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 SLC35D2Q76EJ3 337 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.71□□□□□ -0.37
VRK3-213ENST00000597215 HDDC2Q7Z4H3 204 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 UBE2J2Q8N2K1 259 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 POMGNT2Q8NAT1 580 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 AQP11Q8NBQ7 271 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 ADAD1Q96M93 576 aaKnown RBP12.71□□□□□ -0.37
VRK3-213ENST00000597215 TNFRSF13CQ96RJ3 184 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 GPA33Q99795 319 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 BDH2Q9BUT1 245 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 SLCO5A1Q9H2Y9 848 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 MCCC2Q9HCC0 563 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 MED29Q9NX70 200 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 GALNT8Q9NY28 637 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 ELOVL5Q9NYP7 299 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 PRSS50Q9UI38 385 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 MGAT4BQ9UQ53 548 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 SIGLEC7Q9Y286 467 aa12.71□□□□□ -0.37
VRK3-213ENST00000597215 COL12A1Q99715 3063 aa12.71□□□□□ -0.38
VRK3-213ENST00000597215 NPIPB13A6NJU9 1138 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 ZNF726A6NNF4 738 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 NPIPB4C9JG80 1138 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 MCIDASD6RGH6 385 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 ANKRD65E5RJM6 399 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 ENTPD5O75356 428 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 SLC43A1O75387 559 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 ZNF432O94892 652 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 NDUFB2O95178 105 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 CLDN1O95832 211 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 BCL10O95999 233 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 POU2F1P14859 743 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 EDNRAP25101 427 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 RPL4P36578 427 aaKnown RBP12.7□□□□□ -0.38
VRK3-213ENST00000597215 CD79BP40259 229 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 PCYT1AP49585 367 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 SELENOPP49908 381 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 FBXW9Q5XUX1 488 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 SHQ1Q6PI26 577 aaKnown RBP12.7□□□□□ -0.38
VRK3-213ENST00000597215 TMEM179BQ7Z7N9 219 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 KIF18BQ86Y91 864 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 OR5K1Q8NHB7 308 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 FANK1Q8TC84 345 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 LRTOMTQ8WZ04 291 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 NRBF2Q96F24 287 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 PSMG3-AS1Q96PY0 264 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 OR2M2Q96R28 347 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 DGCR6LQ9BY27 220 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 NTN4Q9HB63 628 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 PDP1Q9P0J1 537 aaPredicted RBP12.7□□□□□ -0.38
VRK3-213ENST00000597215 STX18Q9P2W9 335 aaKnown RBP12.7□□□□□ -0.38
VRK3-213ENST00000597215 UPB1Q9UBR1 384 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 MALT1Q9UDY8 824 aa12.7□□□□□ -0.38
VRK3-213ENST00000597215 SLC35F4A4IF30 521 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 H3BNX3 289 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 PTP4A3O75365 173 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 KRT33AO76009 404 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 ADAP00813 363 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 GASTP01350 101 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 IGHV3-9P01782 118 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 GSTM3P21266 225 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 BIDP55957 195 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 CTXN1P60606 82 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 SORDQ00796 357 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 MELKQ14680 651 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 ACKR1Q16570 336 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 TSPO2Q5TGU0 170 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 SMARCD3Q6STE5 483 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 ABHD12BQ7Z5M8 362 aaPredicted RBP12.69□□□□□ -0.38
VRK3-213ENST00000597215 AMIGO2Q86SJ2 522 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 IGFN1Q86VF2 1251 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 TMEM123Q8N131 208 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 GABRG1Q8N1C3 465 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 LRRC75AQ8NAA5 344 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 OR6X1Q8NH79 312 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 STMN2Q93045 179 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 TXNDC15Q96J42 360 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 FEVQ99581 238 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 EMC6Q9BV81 110 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 POLDIP3Q9BY77 421 aaKnown RBP12.69□□□□□ -0.38
VRK3-213ENST00000597215 LINC00470Q9BZP3 86 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 TXNIPQ9H3M7 391 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 NPDC1Q9NQX5 325 aaPredicted RBP12.69□□□□□ -0.38
VRK3-213ENST00000597215 SLC7A10Q9NS82 523 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 ASB6Q9NWX5 421 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 ICE1Q9Y2F5 2266 aa12.69□□□□□ -0.38
VRK3-213ENST00000597215 SPTAN1Q13813 2472 aaKnown RBP12.69□□□□□ -0.38
VRK3-213ENST00000597215 ADGRG4Q8IZF6 3080 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 IGHMP01871 453 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 CD14P08571 375 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 ZNF26P17031 533 aaPredicted RBP12.68□□□□□ -0.38
VRK3-213ENST00000597215 GRNP28799 593 aaKnown RBP12.68□□□□□ -0.38
VRK3-213ENST00000597215 PEX19P40855 299 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 RPL27P61353 136 aaKnown RBP12.68□□□□□ -0.38
VRK3-213ENST00000597215 FAM27E3Q08E93 113 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 FAPQ12884 760 aa12.68□□□□□ -0.38
VRK3-213ENST00000597215 TOP3AQ13472 1001 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms