RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 BCL2L2Q92843 193 aaPredicted RBP18.47■□□□□ 0.55
PNKP-209ENST00000596726 PIGTQ969N2 578 aa18.47■□□□□ 0.55
PNKP-209ENST00000596726 LRR1Q96L50 414 aa18.47■□□□□ 0.55
PNKP-209ENST00000596726 EMC6Q9BV81 110 aa18.47■□□□□ 0.55
PNKP-209ENST00000596726 NELFAQ9H3P2 528 aa18.47■□□□□ 0.55
PNKP-209ENST00000596726 GPR35Q9HC97 309 aa18.47■□□□□ 0.55
PNKP-209ENST00000596726 C20orf141Q9NUB4 165 aa18.47■□□□□ 0.55
PNKP-209ENST00000596726 MED29Q9NX70 200 aa18.47■□□□□ 0.55
PNKP-209ENST00000596726 ARID1AO14497 2285 aa18.47■□□□□ 0.55
PNKP-209ENST00000596726 MED13LQ71F56 2210 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 SLC35F4A4IF30 521 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 C11orf98E9PRG8 122 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 J3KTA2 159 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 FFAR1O14842 300 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 OR7A10O76100 309 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 PRSS23O95084 383 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 OR6A2O95222 327 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 CDH2P19022 906 aaPredicted RBP18.46■□□□□ 0.55
PNKP-209ENST00000596726 YAP1P46937 504 aaKnown RBP18.46■□□□□ 0.55
PNKP-209ENST00000596726 SH3BGRP55822 239 aaPredicted RBP18.46■□□□□ 0.55
PNKP-209ENST00000596726 PRPS1P60891 318 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 TBRG1Q3YBR2 411 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 HIKESHIQ53FT3 197 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 HMBOX1Q6NT76 420 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 FKBP9P1Q75LS8 142 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 TSEN54Q7Z6J9 526 aaKnown RBP18.46■□□□□ 0.55
PNKP-209ENST00000596726 GPR137CQ8N3F9 429 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 MAGEE2Q8TD90 523 aaPredicted RBP18.46■□□□□ 0.55
PNKP-209ENST00000596726 SGTBQ96EQ0 304 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 GORASP2Q9H8Y8 452 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 MAN2C1Q9NTJ4 1040 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 DCAF13Q9NV06 445 aaKnown RBP18.46■□□□□ 0.55
PNKP-209ENST00000596726 RPS6KA6Q9UK32 745 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 ADAM21Q9UKJ8 722 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 MED31Q9Y3C7 131 aa18.46■□□□□ 0.55
PNKP-209ENST00000596726 PLCE1Q9P212 2302 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 CLOCKO15516 846 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 HIST1H2ABP04908 130 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 TSPAN19P0C672 248 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 FUT1P19526 365 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 PTAFRP25105 342 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 IFNA8P32881 189 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 ZNF83P51522 516 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 ZNF672Q499Z4 452 aaPredicted RBP18.45■□□□□ 0.54
PNKP-209ENST00000596726 ANKRD16Q6P6B7 361 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 KLHL17Q6TDP4 642 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 TMEM108Q6UXF1 575 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 HIST3H2AQ7L7L0 130 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 CCDC197Q8NCU1 140 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 FAM156AQ8NDB6 213 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 RBM15BQ8NDT2 890 aaKnown RBP18.45■□□□□ 0.54
PNKP-209ENST00000596726 KBTBD8Q8NFY9 601 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 NEUROG1Q92886 237 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 HIST1H2ACQ93077 130 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 ZNF837Q96EG3 531 aaPredicted RBP18.45■□□□□ 0.54
PNKP-209ENST00000596726 CDRT15Q96T59 188 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 CCL19Q99731 98 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 OBP2BQ9NPH6 170 aa18.45■□□□□ 0.54
PNKP-209ENST00000596726 MAGED1Q9Y5V3 778 aaPredicted RBP18.45■□□□□ 0.54
PNKP-209ENST00000596726 ARPC4-TTLL3A0A0A6YYG9 625 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 HTR3EA5X5Y0 456 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 ZNF726A6NNF4 738 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 SHISA9B4DS77 424 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 ABCD4O14678 606 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 UMPSP11172 480 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 IFNGR1P15260 489 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 CD40P25942 277 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 HOXC12P31275 282 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 FOXD4Q12950 439 aaPredicted RBP18.44■□□□□ 0.54
PNKP-209ENST00000596726 CAMK2DQ13557 499 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 CEACAM16Q2WEN9 425 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 SAMD4BQ5PRF9 694 aaKnown RBP18.44■□□□□ 0.54
PNKP-209ENST00000596726 C16orf89Q6UX73 402 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 SLC35D2Q76EJ3 337 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 FNDC11Q9BVV2 318 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 C1QTNF6Q9BXI9 259 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 CRLF2Q9HC73 371 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 NDE1Q9NXR1 346 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 RHCGQ9UBD6 479 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 MGAT4BQ9UQ53 548 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 ENPP4Q9Y6X5 453 aa18.44■□□□□ 0.54
PNKP-209ENST00000596726 VPS13CQ709C8 3753 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 RNF13O43567 381 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 PIP5K1CO60331 668 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 SERPINI2O75830 405 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 WNT11O96014 354 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 HOXB1P14653 301 aaPredicted RBP18.43■□□□□ 0.54
PNKP-209ENST00000596726 PAX7P23759 505 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 MNAT1P51948 309 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 BIDP55957 195 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 LSM11P83369 360 aaKnown RBP eCLIP18.43■□□□□ 0.54
PNKP-209ENST00000596726 ARF1P84077 181 aaKnown RBP18.43■□□□□ 0.54
PNKP-209ENST00000596726 TRAM2Q15035 370 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 SPATS1Q496A3 300 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 CARD17Q5XLA6 110 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 KLHL24Q6TFL4 600 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 NANOGNBQ7Z5D8 188 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 DEFB107AQ8IZN7 70 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 LRRC75A-AS1Q8N1F1 130 aa18.43■□□□□ 0.54
PNKP-209ENST00000596726 OR6X1Q8NH79 312 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms