RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 TMEM251Q8N6I4 163 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 ZFP62Q8NB50 900 aaPredicted RBP13.62□□□□□ -0.23
VRK3-207ENST00000594092 LSM14AQ8ND56 463 aaKnown RBP13.62□□□□□ -0.23
VRK3-207ENST00000594092 NPEPL1Q8NDH3 523 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 YIPF6Q96EC8 236 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 COG8Q96MW5 612 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 DDOQ99489 341 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 NAA50Q9GZZ1 169 aaKnown RBP13.62□□□□□ -0.23
VRK3-207ENST00000594092 ZNF346Q9UL40 294 aaKnown RBP13.62□□□□□ -0.23
VRK3-207ENST00000594092 B3GALT5Q9Y2C3 310 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 LAMA5O15230 3695 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 SLC22A31A6NKX4 558 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 SULT2B1O00204 365 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 MYL12BO14950 172 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 SERPINI2O75830 405 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 PMS2P2O95744 297 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 CELA3AP09093 270 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 ATP6V1E1P36543 226 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 MAGEA5P43359 124 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 ID4P47928 161 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 GFRA1P56159 465 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 TMED1Q13445 227 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 MED22Q15528 200 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 KLHL12Q53G59 568 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 EMC4Q5J8M3 183 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 GPR139Q6DWJ6 353 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 ANKRD13BQ86YJ7 626 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 KDM8Q8N371 416 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 TMEM99Q8N816 258 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 NMNAT3Q96T66 252 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 GRHPRQ9UBQ7 328 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 ENPP5Q9UJA9 477 aa13.62□□□□□ -0.23
VRK3-207ENST00000594092 EXOSC1Q9Y3B2 195 aaKnown RBP13.62□□□□□ -0.23
VRK3-207ENST00000594092 A0A0J9YW62 118 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 GJE1A6NN92 205 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 APOL3O95236 402 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 PLGP00747 810 aaPredicted RBP13.61□□□□□ -0.23
VRK3-207ENST00000594092 HLA-DOBP13765 273 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 SLC2A5P22732 501 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 CDKN2AP42771 156 aaKnown RBP13.61□□□□□ -0.23
VRK3-207ENST00000594092 CD97P48960 835 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 P2RY4P51582 365 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 RPS7P62081 194 aaKnown RBP13.61□□□□□ -0.23
VRK3-207ENST00000594092 PPIAP62937 165 aaKnown RBP13.61□□□□□ -0.23
VRK3-207ENST00000594092 SLC35A1P78382 337 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 KRR1Q13601 381 aaKnown RBP13.61□□□□□ -0.23
VRK3-207ENST00000594092 C1DQ13901 141 aaKnown RBP13.61□□□□□ -0.23
VRK3-207ENST00000594092 ACKR1Q16570 336 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 MESTQ5EB52 335 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 P2RY8Q86VZ1 359 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 NANOGP1Q8N7R0 232 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 ADPRHL1Q8NDY3 354 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 PROKR2Q8NFJ6 384 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 ZPLD1Q8TCW7 415 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 KLHL15Q96M94 604 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 BCL7BQ9BQE9 202 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 RACGAP1Q9H0H5 632 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 OR51V1Q9H2C8 321 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 TXNIPQ9H3M7 391 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 CLEC2DQ9UHP7 191 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 EXOGQ9Y2C4 368 aaKnown RBP13.61□□□□□ -0.23
VRK3-207ENST00000594092 DMXL2Q8TDJ6 3036 aa13.61□□□□□ -0.23
VRK3-207ENST00000594092 URB1O60287 2271 aaKnown RBP13.61□□□□□ -0.23
VRK3-207ENST00000594092 OR6C68A6NDL8 312 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 IGHMP01871 453 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 HSMCR30P0CW71 290 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 CLUP10909 449 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 CD36P16671 472 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 SLC16A1P53985 500 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 SH3BGRP55822 239 aaPredicted RBP13.6□□□□□ -0.23
VRK3-207ENST00000594092 CLDN20P56880 219 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 RPL27P61353 136 aaKnown RBP13.6□□□□□ -0.23
VRK3-207ENST00000594092 ZNF239Q16600 458 aaKnown RBP13.6□□□□□ -0.23
VRK3-207ENST00000594092 ARMCX4Q5H9R4 360 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 LEG1Q6P5S2 330 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 SHFQ7M4L6 423 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 JAZF1Q86VZ6 243 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 ERI1Q8IV48 349 aaKnown RBP13.6□□□□□ -0.23
VRK3-207ENST00000594092 GHDCQ8N2G8 530 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 DCBLD2Q96PD2 775 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 OR5M11Q96RB7 305 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 NMNAT2Q9BZQ4 307 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 FANCFQ9NPI8 374 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 TRAV17A0A0B4J275 112 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 A0A1W2PNV4 684 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 A0A1W2PRG6 482 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 CCDC182A6NF36 153 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 ZNF814B7Z6K7 855 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 H0YC42 278 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 LINC01387J3KSC0 135 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 TNFSF11O14788 317 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 RRP8O43159 456 aaKnown RBP13.6□□□□□ -0.23
VRK3-207ENST00000594092 GABARAPO95166 117 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 GYPBP06028 91 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 ADRB1P08588 477 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 STARP49675 285 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 SPHARQ15513 63 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 PAQR6Q6TCH4 344 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 SLC16A12Q6ZSM3 486 aa13.6□□□□□ -0.23
VRK3-207ENST00000594092 GGNQ86UU5 652 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms