RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 M0R3G1 203 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 CAPZA2P47755 286 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 CHN2P52757 468 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 STX1BP61266 288 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 CDK6Q00534 326 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 SNTB2Q13425 540 aaKnown RBP20.67■□□□□ 0.9
LSM4-202ENST00000593564 DAG1Q14118 895 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 SQLEQ14534 574 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 CR1LQ2VPA4 569 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 MS4A18Q3C1V0 323 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 PHYHD1Q5SRE7 291 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 REEP3Q6NUK4 255 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 KRT73Q86Y46 540 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 C20orf196Q8IYI0 205 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 ZNF786Q8N393 782 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 SCAIQ8N9R8 606 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 SLC47A1Q96FL8 570 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 LRR1Q96L50 414 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 SPATA5L1Q9BVQ7 753 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 DYNLRB1Q9NP97 96 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 B3GNT2Q9NY97 397 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 TESQ9UGI8 421 aaKnown RBP20.67■□□□□ 0.9
LSM4-202ENST00000593564 GMEB1Q9Y692 573 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 A0A087WUJ7 227 aa20.66■□□□□ 0.9
LSM4-202ENST00000593564 TPST1O60507 370 aa20.66■□□□□ 0.9
LSM4-202ENST00000593564 LILRA1O75019 489 aa20.66■□□□□ 0.9
LSM4-202ENST00000593564 SEC14L2O76054 403 aa20.66■□□□□ 0.9
LSM4-202ENST00000593564 HPRP00739 348 aa20.66■□□□□ 0.9
LSM4-202ENST00000593564 IGFBP1P08833 259 aaPredicted RBP20.66■□□□□ 0.9
LSM4-202ENST00000593564 NQO1P15559 274 aaKnown RBP20.66■□□□□ 0.9
LSM4-202ENST00000593564 CBLP22681 906 aa20.66■□□□□ 0.9
LSM4-202ENST00000593564 SRSF2Q01130 221 aaKnown RBP20.66■□□□□ 0.9
LSM4-202ENST00000593564 POU3F1Q03052 451 aaPredicted RBP20.66■□□□□ 0.9
LSM4-202ENST00000593564 ADRM1Q16186 407 aa20.66■□□□□ 0.9
LSM4-202ENST00000593564 CDK20Q8IZL9 346 aa20.66■□□□□ 0.9
LSM4-202ENST00000593564 C10orf111Q8N326 155 aa20.66■□□□□ 0.9
LSM4-202ENST00000593564 CKAP2Q8WWK9 683 aa20.66■□□□□ 0.9
LSM4-202ENST00000593564 TLCD1Q96CP7 247 aa20.66■□□□□ 0.9
LSM4-202ENST00000593564 EPYCQ99645 322 aa20.66■□□□□ 0.9
LSM4-202ENST00000593564 HLA-HP01893 362 aa20.65■□□□□ 0.9
LSM4-202ENST00000593564 HLA-DOBP13765 273 aa20.65■□□□□ 0.9
LSM4-202ENST00000593564 NR4A1P22736 598 aa20.65■□□□□ 0.9
LSM4-202ENST00000593564 PPIBP23284 216 aaKnown RBP20.65■□□□□ 0.9
LSM4-202ENST00000593564 NCALDP61601 193 aa20.65■□□□□ 0.9
LSM4-202ENST00000593564 GLIPR1L2Q4G1C9 344 aa20.65■□□□□ 0.9
LSM4-202ENST00000593564 KRT80Q6KB66 452 aa20.65■□□□□ 0.9
LSM4-202ENST00000593564 BLOC1S3Q6QNY0 202 aa20.65■□□□□ 0.9
LSM4-202ENST00000593564 ZNF627Q7L945 461 aa20.65■□□□□ 0.9
LSM4-202ENST00000593564 UBASH3BQ8TF42 649 aa20.65■□□□□ 0.9
LSM4-202ENST00000593564 SELENONQ9NZV5 590 aa20.65■□□□□ 0.9
LSM4-202ENST00000593564 SLAMF8Q9P0V8 285 aa20.65■□□□□ 0.9
LSM4-202ENST00000593564 CMAHPQ9Y471 501 aa20.65■□□□□ 0.9
LSM4-202ENST00000593564 A0A0B4J2E0 115 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 A0A1B0GX12 115 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 SH3PXD2BA1X283 911 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 PRORSD1PA6NEY8 169 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 BGLAPP02818 100 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 ADRA2AP08913 450 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 APEX1P27695 318 aaKnown RBP20.64■□□□□ 0.89
LSM4-202ENST00000593564 IL2RGP31785 369 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 RIN1Q13671 783 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 GSG1Q2KHT4 349 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 CARD17Q5XLA6 110 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 NHLRC1Q6VVB1 395 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 FUNDC1Q8IVP5 155 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 EMC6Q9BV81 110 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 ASPNQ9BXN1 380 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 TMEM27Q9HBJ8 222 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 B3GAT2Q9NPZ5 323 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 TCF7L2Q9NQB0 619 aa20.64■□□□□ 0.89
LSM4-202ENST00000593564 POLR3GO15318 223 aaPredicted RBP20.63■□□□□ 0.89
LSM4-202ENST00000593564 EVX1P49640 407 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 RGS8P57771 180 aaPredicted RBP20.63■□□□□ 0.89
LSM4-202ENST00000593564 OR1Q1Q15612 314 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 ZNF813Q6ZN06 617 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 LINC01356Q8N9X3 169 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 BHLHE22Q8NFJ8 381 aaPredicted RBP20.63■□□□□ 0.89
LSM4-202ENST00000593564 RNF217Q8TC41 542 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 MRPL24Q96A35 216 aaKnown RBP20.63■□□□□ 0.89
LSM4-202ENST00000593564 SPDL1Q96EA4 605 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 C7orf26Q96N11 449 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 ZNF75AQ96N20 296 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 SNX18Q96RF0 628 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 TMEM38AQ9H6F2 299 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 TMBIM4Q9HC24 238 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 SLC52A3Q9NQ40 469 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 MED29Q9NX70 200 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 MRPL39Q9NYK5 338 aaKnown RBP20.63■□□□□ 0.89
LSM4-202ENST00000593564 VAPAQ9P0L0 249 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 POFUT2Q9Y2G5 429 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 NOX1Q9Y5S8 564 aa20.63■□□□□ 0.89
LSM4-202ENST00000593564 TRBV5-3A0A0A0MS03 114 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 TGDSO95455 350 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 CD79AP11912 226 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 ZNF35P13682 527 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 IFNGR1P15260 489 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 ZNF14P17017 642 aaPredicted RBP20.62■□□□□ 0.89
LSM4-202ENST00000593564 PUDPQ08623 228 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 PMS2P3Q13401 168 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 SCARB2Q14108 478 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms