RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 TAS2R10Q9NYW0 307 aa17.83■□□□□ 0.44
CLIP3-206ENST00000593074 TMEM72A0PK05 275 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 RENP00797 406 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 EIF4EP06730 217 aaKnown RBP17.82■□□□□ 0.44
CLIP3-206ENST00000593074 RBMS1P29558 406 aaKnown RBP17.82■□□□□ 0.44
CLIP3-206ENST00000593074 PSMB10P40306 273 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 HTR3AP46098 478 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 EEF1A1P5Q5VTE0 462 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 CDC20BQ86Y33 519 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 OR6V1Q8N148 313 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 SAMD12Q8N8I0 201 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 C19orf18Q8NEA5 215 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 DUSP19Q8WTR2 217 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 PHYHIPQ92561 330 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 NECAB3Q96P71 396 aaPredicted RBP17.82■□□□□ 0.44
CLIP3-206ENST00000593074 OR14A2Q96R54 314 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 KLHDC2Q9Y2U9 406 aa17.82■□□□□ 0.44
CLIP3-206ENST00000593074 VSTM2BA6NLU5 285 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 A8MVM7 634 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 NPR2P20594 1047 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 ZNF544Q6NX49 715 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 C16orf47Q6ZP98 133 aaPredicted RBP17.81■□□□□ 0.44
CLIP3-206ENST00000593074 KCTD20Q7Z5Y7 419 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 TMEM105Q8N8V8 129 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 DTWD2Q8NBA8 298 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 TRMT10AQ8TBZ6 339 aaKnown RBP17.81■□□□□ 0.44
CLIP3-206ENST00000593074 WDR77Q9BQA1 342 aaPredicted RBP17.81■□□□□ 0.44
CLIP3-206ENST00000593074 SRA1Q9HD15 236 aaKnown RBP17.81■□□□□ 0.44
CLIP3-206ENST00000593074 A0A0G2JMP0 313 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 A0A0X1KG70 313 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 NOTOA8MTQ0 251 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 TALDO1P37837 337 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 COL28A1Q2UY09 1125 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 CEP78Q5JTW2 689 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 C1orf140Q5VVS0 124 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 C5orf46Q6UWT4 87 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 SCAIQ8N9R8 606 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 OR4M2Q8NGB6 313 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 OR4M1Q8NGD0 313 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 STK35Q8TDR2 534 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 ZC3HAV1LQ96H79 300 aaKnown RBP17.81■□□□□ 0.44
CLIP3-206ENST00000593074 MNTQ99583 582 aa17.81■□□□□ 0.44
CLIP3-206ENST00000593074 ADAMTS9Q9P2N4 1935 aa17.8■□□□□ 0.44
CLIP3-206ENST00000593074 B4DXG7 233 aa17.8■□□□□ 0.44
CLIP3-206ENST00000593074 FLRT2O43155 660 aa17.8■□□□□ 0.44
CLIP3-206ENST00000593074 ZNF354AO60765 605 aaPredicted RBP17.8■□□□□ 0.44
CLIP3-206ENST00000593074 ABHD16AO95870 558 aa17.8■□□□□ 0.44
CLIP3-206ENST00000593074 FGF5P12034 268 aa17.8■□□□□ 0.44
CLIP3-206ENST00000593074 NANOS3P60323 173 aaKnown RBP17.8■□□□□ 0.44
CLIP3-206ENST00000593074 IL11RAQ14626 422 aa17.8■□□□□ 0.44
CLIP3-206ENST00000593074 PAPD4Q6PIY7 484 aaKnown RBP17.8■□□□□ 0.44
CLIP3-206ENST00000593074 HAVCR2Q8TDQ0 301 aa17.8■□□□□ 0.44
CLIP3-206ENST00000593074 SNX18Q96RF0 628 aa17.8■□□□□ 0.44
CLIP3-206ENST00000593074 CTRCQ99895 268 aa17.8■□□□□ 0.44
CLIP3-206ENST00000593074 MMP28Q9H239 520 aa17.8■□□□□ 0.44
CLIP3-206ENST00000593074 SYT4Q9H2B2 425 aa17.8■□□□□ 0.44
CLIP3-206ENST00000593074 INIPQ9NRY2 104 aa17.8■□□□□ 0.44
CLIP3-206ENST00000593074 ANKRD61A6NGH8 418 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 DXOO77932 396 aaKnown RBP17.79■□□□□ 0.44
CLIP3-206ENST00000593074 PAHP00439 452 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 TACSTD2P09758 323 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 EPXP11678 715 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 PRKCAP17252 672 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 KIR2DL3P43628 341 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 MAP2K3P46734 347 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 FBXW4P57775 412 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 YIF1BQ5BJH7 314 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 FAM220AQ7Z4H9 259 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 ZNF519Q8TB69 540 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 RNF138Q8WVD3 245 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 SLC25A36Q96CQ1 311 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 MRM2Q9UI43 246 aaKnown RBP17.79■□□□□ 0.44
CLIP3-206ENST00000593074 ZNF281Q9Y2X9 895 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 CPAMD8Q8IZJ3 1885 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 PCNX3Q9H6A9 2034 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 A0A1W2PPK0 400 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 TMEM200CA6NKL6 621 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 ZNF879B4DU55 563 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 D6RAR5 112 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 C11orf98E9PRG8 122 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 PSMD9O00233 223 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 MEN1O00255 615 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 NTN3O00634 580 aaPredicted RBP17.79■□□□□ 0.44
CLIP3-206ENST00000593074 UPK3AO75631 287 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 IGHMP01871 453 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 ATF1P18846 271 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 MRPL28Q13084 256 aaKnown RBP17.79■□□□□ 0.44
CLIP3-206ENST00000593074 TRA2AQ13595 282 aaKnown RBP eCLIP17.79■□□□□ 0.44
CLIP3-206ENST00000593074 HSD17B12Q53GQ0 312 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 LCN10Q6JVE6 187 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 OR8K3Q8NH51 312 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 ENKURQ8TC29 256 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 TMEM234Q8WY98 164 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 RGP1Q92546 391 aaPredicted RBP17.79■□□□□ 0.44
CLIP3-206ENST00000593074 HGDQ93099 445 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 DNAJA3Q96EY1 480 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 SPSB2Q99619 263 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 SLC26A1Q9H2B4 701 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 WDR76Q9H967 626 aa17.79■□□□□ 0.44
CLIP3-206ENST00000593074 RBFOX1Q9NWB1 397 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms