RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 SMN1Q16637 294 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 ZNF362Q5T0B9 420 aaPredicted RBP9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 LCN1P1Q5VSP4 162 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 PLBD1Q6P4A8 553 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 PRSS48Q7RTY5 328 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 IGFN1Q86VF2 1251 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 TMEM99Q8N816 258 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 SLC37A3Q8NCC5 494 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 OR4K13Q8NH42 304 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 OTULINQ96BN8 352 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 FKBP14Q9NWM8 211 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 GPR52Q9Y2T5 361 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 ADAM18Q9Y3Q7 739 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 AKAP13Q12802 2813 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 A0A0J9YW62 118 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 TEX13CA0A0J9YWL9 993 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 CENPBD1B2RD01 187 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 TNFSF11O14788 317 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 XPNPEP2O43895 674 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 ATP6V1G1O75348 118 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 IGHG3P01860 377 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 OPN1LWP04000 364 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 DBTP11182 482 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 CPN1P15169 458 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 HOXD11P31277 338 aaPredicted RBP9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 ATP6V1E1P36543 226 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 ACVR1BP36896 505 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 RFC3P40938 356 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 SLC15A1P46059 708 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 RPL5P46777 297 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 CXADRP78310 365 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 DYNC1I2Q13409 638 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 KRR1Q13601 381 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 SF3B4Q15427 424 aaKnown RBP eCLIP9.47□□□□□ -0.894e-7■■□□□ 11.6
NEDD4L-224ENST00000588712 RNLSQ5VYX0 342 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 VASNQ6EMK4 673 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 SLC35D2Q76EJ3 337 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 GGNQ86UU5 652 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 OR2T4Q8NH00 348 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 C9orf43Q8TAL5 461 aaPredicted RBP9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 GGHQ92820 318 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 PTP4A1Q93096 173 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 ABHD17AQ96GS6 310 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 TMEM80Q96HE8 168 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 Q96M85 177 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 TSPAN32Q96QS1 320 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 TSC22D3Q99576 134 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 ARHGAP9Q9BRR9 750 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 HINT3Q9NQE9 182 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 HAO2Q9NYQ3 351 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 DNAJC27Q9NZQ0 273 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 AASSQ9UDR5 926 aa9.47□□□□□ -0.89
NEDD4L-224ENST00000588712 A0A1B0GVC2 190 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 TRIM64CA6NLI5 447 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 M0R129 80 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 SYNGR4O95473 234 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 SLC2A10O95528 541 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 CDK1P06493 297 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 DCKP27707 260 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 SHC1P29353 583 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 CRABP1P29762 137 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 EIF1AXP47813 144 aaKnown RBP9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 LHX2P50458 406 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 MLLT10P55197 1068 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 POU3F1Q03052 451 aaPredicted RBP9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 ST3GAL4Q11206 333 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 APOFQ13790 326 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 CRMP1Q14194 572 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 GXYLT1Q4G148 440 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 GTF2IRD2BQ6EKJ0 949 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 LEG1Q6P5S2 330 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 DNM1P34Q6PK57 102 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 AHSA2Q719I0 299 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 GTF2IRD2Q86UP8 949 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 PM20D2Q8IYS1 436 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 NPEPL1Q8NDH3 523 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 ZCCHC14Q8WYQ9 949 aaKnown RBP9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 FCGR1BQ92637 280 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 DNAJA3Q96EY1 480 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 ADGRG7Q96K78 797 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 NMNAT3Q96T66 252 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 DDOQ99489 341 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 TEAD3Q99594 435 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 YIPF3Q9GZM5 350 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 CCDC90BQ9GZT6 254 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 DEFB127Q9H1M4 99 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 MCTS1Q9ULC4 181 aaKnown RBP9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 CSAG2Q9Y5P2 127 aa9.46□□□□□ -0.89
NEDD4L-224ENST00000588712 ZNF726A6NNF4 738 aa9.46□□□□□ -0.9
NEDD4L-224ENST00000588712 NPIPA2E9PIF3 369 aa9.46□□□□□ -0.9
NEDD4L-224ENST00000588712 NPIPA3F8WFD2 350 aa9.46□□□□□ -0.9
NEDD4L-224ENST00000588712 ARHGEF9O43307 516 aa9.46□□□□□ -0.9
NEDD4L-224ENST00000588712 CELA3AP09093 270 aa9.46□□□□□ -0.9
NEDD4L-224ENST00000588712 ATP6V1B1P15313 513 aa9.46□□□□□ -0.9
NEDD4L-224ENST00000588712 TTKP33981 857 aa9.46□□□□□ -0.9
NEDD4L-224ENST00000588712 STARP49675 285 aa9.46□□□□□ -0.9
NEDD4L-224ENST00000588712 P2RY4P51582 365 aa9.46□□□□□ -0.9
NEDD4L-224ENST00000588712 CLDN15P56746 228 aa9.46□□□□□ -0.9
NEDD4L-224ENST00000588712 CLDN18P56856 261 aa9.46□□□□□ -0.9
NEDD4L-224ENST00000588712 CLDN20P56880 219 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms