RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 ZNF442Q9H7R0 627 aa13.13□□□□□ -0.31
PRKCSH-204ENST00000587290 TMBIM4Q9HC24 238 aa13.13□□□□□ -0.31
PRKCSH-204ENST00000587290 DYNLRB1Q9NP97 96 aa13.13□□□□□ -0.31
PRKCSH-204ENST00000587290 CCDC167Q9P0B6 97 aa13.13□□□□□ -0.31
PRKCSH-204ENST00000587290 A0A087WUJ7 227 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 ZNF99A8MXY4 864 aaPredicted RBP13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 BGLAPP02818 100 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 ADRA2AP08913 450 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 CD79AP11912 226 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 ETS2P15036 469 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 B4GALT1P15291 398 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 RGS8P57771 180 aaPredicted RBP13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 CAMK2DQ13557 499 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 CCNIQ14094 377 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 ADRM1Q16186 407 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 CR1LQ2VPA4 569 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 C3orf36Q3SXR2 165 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 LRIF1Q5T3J3 769 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 DHRS4L2Q6PKH6 230 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 UEVLDQ8IX04 471 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 FAM169BQ8N8A8 192 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 LSMEM1Q8N8F7 131 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 PIK3C3Q8NEB9 887 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 CKAP2Q8WWK9 683 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 SLC35B4Q969S0 331 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 SPDL1Q96EA4 605 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 RAB1BQ9H0U4 201 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 RAD21L1Q9H4I0 556 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 SLC52A3Q9NQ40 469 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 TCF7L2Q9NQB0 619 aa13.12□□□□□ -0.31
PRKCSH-204ENST00000587290 NBEAL1Q6ZS30 2694 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 M0R3H8 397 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 POLR3GO15318 223 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 OR2T1O43869 369 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 LILRA1O75019 489 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 TCN1P20061 433 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 ARR3P36575 388 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 IDH3AP50213 366 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 SLC18A1P54219 525 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 STX1BP61266 288 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 NCALDP61601 193 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 SCARB2Q14108 478 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 DAG1Q14118 895 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 OR1Q1Q15612 314 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 REEP3Q6NUK4 255 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 BLOC1S3Q6QNY0 202 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 C20orf196Q8IYI0 205 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 C10orf53Q8N6V4 93 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 SMYD1Q8NB12 490 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 C1orf159Q96HA4 380 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 SYT3Q9BQG1 590 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 MRPL37Q9BZE1 423 aaKnown RBP13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 C12orf10Q9HB07 376 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 MYOZ1Q9NP98 299 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 B3GNT2Q9NY97 397 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 ZNF224Q9NZL3 707 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 PRDM4Q9UKN5 801 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 FZR1Q9UM11 496 aa13.11□□□□□ -0.31
PRKCSH-204ENST00000587290 TRBV5-3A0A0A0MS03 114 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 A0A0B4J2E0 115 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 A0A1B0GX12 115 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 ZNF500O60304 480 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 OPN1SWP03999 348 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 PATE4P0C8F1 98 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 HOXB1P14653 301 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 APEX1P27695 318 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 CDH12P55289 794 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 MFSD13AQ14CX5 517 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 MAD2L1BPQ15013 274 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 ULK3Q6PHR2 472 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 ZNF813Q6ZN06 617 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 LRP11Q86VZ4 500 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 CARM1Q86X55 608 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 ANKK1Q8NFD2 765 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 DNAJA4Q8WW22 397 aaPredicted RBP13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 SLC47A1Q96FL8 570 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 SLC41A3Q96GZ6 507 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 ZNF75AQ96N20 296 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 ANKRD27Q96NW4 1050 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 NARFLQ9H6Q4 476 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 MYEF2Q9P2K5 600 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 TESQ9UGI8 421 aaKnown RBP13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 USP22Q9UPT9 525 aa13.1□□□□□ -0.31
PRKCSH-204ENST00000587290 C11orf98E9PRG8 122 aa13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 AKAP8O43823 692 aaKnown RBP13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 IFNGR1P15260 489 aa13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 ZNF14P17017 642 aaPredicted RBP13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 AHCYP23526 432 aa13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 GIFP27352 417 aa13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 ALDH3B1P43353 468 aa13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 PTDSS1P48651 473 aaKnown RBP13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 PUDPQ08623 228 aa13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 PMS2P3Q13401 168 aa13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 SELPLGQ14242 412 aa13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 GSG1Q2KHT4 349 aa13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 AGKQ53H12 422 aa13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 FAM91A1Q658Y4 838 aa13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 NHLRC1Q6VVB1 395 aa13.09□□□□□ -0.31
PRKCSH-204ENST00000587290 WDR88Q6ZMY6 472 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms