RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 TMEM129A0AVI4 362 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 LRP5LA4QPB2 252 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 ZNF99A8MXY4 864 aaPredicted RBP12.11□□□□□ -0.47
ATG4D-206ENST00000586863 M0R3G1 203 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 TGDSO95455 350 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 STAMBPO95630 424 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 HLA-DOBP13765 273 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 NPR2P20594 1047 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 ARR3P36575 388 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 CAPZA2P47755 286 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 CDK6Q00534 326 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 PAGE3Q5JUK9 113 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 CARD17Q5XLA6 110 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 DHRS4L2Q6PKH6 230 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 C5orf46Q6UWT4 87 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 H1FNTQ75WM6 255 aaPredicted RBP12.11□□□□□ -0.47
ATG4D-206ENST00000586863 SPATA21Q7Z572 469 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 CDK20Q8IZL9 346 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 ADPRHL1Q8NDY3 354 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 PIK3C3Q8NEB9 887 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 DNAJA4Q8WW22 397 aaPredicted RBP12.11□□□□□ -0.47
ATG4D-206ENST00000586863 WFDC6Q9BQY6 131 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 RAB1BQ9H0U4 201 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 SLCO1B3Q9NPD5 702 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 TCF7L2Q9NQB0 619 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 VAPAQ9P0L0 249 aa12.11□□□□□ -0.47
ATG4D-206ENST00000586863 A0A087WUJ7 227 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 TRBV5-3A0A0A0MS03 114 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 A0A0B4J2E0 115 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 LOC102725191A0A1B0GVB3 256 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 A0A1B0GX12 115 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 MS4A18H0YCH9 400 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 POLR3GO15318 223 aaPredicted RBP12.1□□□□□ -0.47
ATG4D-206ENST00000586863 AKAP8O43823 692 aaKnown RBP12.1□□□□□ -0.47
ATG4D-206ENST00000586863 TPST2O60704 377 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 TGFAP01135 160 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 HLA-HP01893 362 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 BGLAPP02818 100 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 DAOP14920 347 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 IL2RGP31785 369 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 THBS2P35442 1172 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 STX1BP61266 288 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 POU3F1Q03052 451 aaPredicted RBP12.1□□□□□ -0.47
ATG4D-206ENST00000586863 SNTB2Q13425 540 aaKnown RBP12.1□□□□□ -0.47
ATG4D-206ENST00000586863 MSMPQ1L6U9 139 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 MS4A18Q3C1V0 323 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 FAM91A1Q658Y4 838 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 KRT80Q6KB66 452 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 REEP3Q6NUK4 255 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 ULK3Q6PHR2 472 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 BLOC1S3Q6QNY0 202 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 NET1Q7Z628 596 aaPredicted RBP12.1□□□□□ -0.47
ATG4D-206ENST00000586863 UEVLDQ8IX04 471 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 C20orf196Q8IYI0 205 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 ZNF540Q8NDQ6 660 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 SPDL1Q96EA4 605 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 SLC41A3Q96GZ6 507 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 ANKRD27Q96NW4 1050 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 EBF4Q9BQW3 602 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 EMC6Q9BV81 110 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 SLC52A3Q9NQ40 469 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 MED29Q9NX70 200 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 TESQ9UGI8 421 aaKnown RBP12.1□□□□□ -0.47
ATG4D-206ENST00000586863 USP22Q9UPT9 525 aa12.1□□□□□ -0.47
ATG4D-206ENST00000586863 TENM1Q9UKZ4 2725 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 SH3PXD2BA1X283 911 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 LRRN3E7EW58 273 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 LILRA1O75019 489 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 NQO1P15559 274 aaKnown RBP12.09□□□□□ -0.47
ATG4D-206ENST00000586863 GIFP27352 417 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 AQP1P29972 269 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 IDH3AP50213 366 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 RGS8P57771 180 aaPredicted RBP12.09□□□□□ -0.47
ATG4D-206ENST00000586863 NCALDP61601 193 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 SCARB2Q14108 478 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 DAG1Q14118 895 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 OR1Q1Q15612 314 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 CR1LQ2VPA4 569 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 NHLRC1Q6VVB1 395 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 KRT73Q86Y46 540 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 SCAIQ8N9R8 606 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 RNF217Q8TC41 542 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 NEU4Q8WWR8 484 aaPredicted RBP12.09□□□□□ -0.47
ATG4D-206ENST00000586863 SLC47A1Q96FL8 570 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 TXNDC15Q96J42 360 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 MOGAT1Q96PD6 335 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 SPATA5L1Q9BVQ7 753 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 C19orf24Q9BVV8 132 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 DYNLRB1Q9NP97 96 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 B3GNT2Q9NY97 397 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 CCDC167Q9P0B6 97 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 FBXO9Q9UK97 447 aaPredicted RBP12.09□□□□□ -0.47
ATG4D-206ENST00000586863 CORINQ9Y5Q5 1042 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 GMEB1Q9Y692 573 aa12.09□□□□□ -0.47
ATG4D-206ENST00000586863 ADRA2AP08913 450 aa12.08□□□□□ -0.48
ATG4D-206ENST00000586863 TACSTD2P09758 323 aa12.08□□□□□ -0.48
ATG4D-206ENST00000586863 B4GALT1P15291 398 aa12.08□□□□□ -0.48
ATG4D-206ENST00000586863 HNF1AP20823 631 aa12.08□□□□□ -0.48
ATG4D-206ENST00000586863 AQP5P55064 265 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms