RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 ACOT7O00154 380 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LDOC1O95751 146 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CD14P08571 375 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR8G3PP0DMU2 310 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ADRA2CP18825 462 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 GRK6P43250 576 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 RAD52P43351 418 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TPMTP51580 245 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PGDP52209 483 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ALKBH1Q13686 389 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF74Q16587 644 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 KLHL26Q53HC5 615 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TCTE1Q5JU00 501 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SLC25A25Q6KCM7 469 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FAM220AQ7Z4H9 259 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 JAZF1Q86VZ6 243 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF595Q8IYB9 648 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF440Q8IYI8 595 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SLC22A18ASQ8N1D0 253 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LRRC75AQ8NAA5 344 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR5AK2Q8NH90 309 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 C15orf40Q8WUR7 153 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 DGAT2Q96PD7 388 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 B3GNT4Q9C0J1 378 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CDCP1Q9H5V8 836 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TAS2R5Q9NYW4 299 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 POMT2Q9UKY4 750 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MRPS33Q9Y291 106 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FKBP7Q9Y680 259 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TRBV5-5A0A0J9YX44 114 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ELOA3DA6NLF2 546 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 B8ZZF3 427 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 M0R233 179 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LINC01565O15544 149 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ABHD16AO95870 558 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PTHLHP12272 177 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 IFNGR1P15260 489 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CTHP32929 405 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MECP2P51608 486 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TSPAN5P62079 268 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FUT7Q11130 342 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PRTGQ2VWP7 1150 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LINC00303Q3SY05 128 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ELOA3BQ3SY89 546 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 COMMD7Q86VX2 200 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 DND1Q8IYX4 353 aaKnown RBP12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ELOA3Q8NG57 546 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR13H1Q8NG92 308 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CDCA3Q99618 268 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SEC22CQ9BRL7 303 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR10A5Q9H207 317 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PIPOXQ9P0Z9 390 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ERVK-19Q9WJR5 959 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MAB21L2Q9Y586 359 aa12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TP53BP1Q12888 1972 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-237ENST00000585163 RANBP2P49792 3224 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CIB4A0PJX0 185 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 I3L521 148 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CELA2BP08218 269 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PNMTP11086 282 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SDHAP31040 664 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 DCTDP32321 178 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 BTG2P78543 158 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 DHODHQ02127 395 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ERV3-1Q14264 604 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 C4orf46Q504U0 113 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 WBP2NLQ6ICG8 309 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 DNM1P46Q6ZS02 220 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ATG4DQ86TL0 474 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LRRTM1Q86UE6 522 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MCATQ8IVS2 390 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ADAD1Q96M93 576 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MOGAT1Q96PD6 335 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PRTFDC1Q9NRG1 225 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MGAT4CQ9UBM8 478 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 NUP50Q9UKX7 468 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PCDHGA5Q9Y5G8 931 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 HS3ST3A1Q9Y663 406 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 USP34Q70CQ2 3546 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 BLACEA4D250 179 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR2W5A6NFC9 320 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 RRASP10301 218 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TAS2R20P59543 309 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MAT1AQ00266 395 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ALG10Q5BKT4 473 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FAAP20Q6NZ36 180 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CDC20BQ86Y33 519 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 C19orf47Q8N9M1 422 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 AVL9Q8NBF6 648 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 THEM6Q8WUY1 208 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PCNPQ8WW12 178 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF578Q96N58 590 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 UQCC2Q9BRT2 126 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 GSX2Q9BZM3 304 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CHIAQ9BZP6 476 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MMP25Q9NPA2 562 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CA10Q9NS85 328 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 KCNN3Q9UGI6 736 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SLC6A5Q9Y345 797 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms